RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HINT3Q9NQE9 182 aaKnown RBP7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 MMP26Q9NRE1 261 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 VAPAQ9P0L0 249 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 SEC14L4Q9UDX3 406 aa7.68□□□□□ -1.18
VPS9D1-205ENST00000565452 A0A0G2JPF8 293 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 C17orf100A8MU93 164 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 HNRNPCL2B2RXH8 293 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SRRM5B3KS81 715 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 HNRNPCL3B7ZW38 293 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 NPIPB9F8W1W9 429 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 HMGN4O00479 90 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 TRAF3IP2O43734 574 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 PIP5K1CO60331 668 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 HNRNPCL1O60812 293 aaKnown RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 OPN1MWP04001 364 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 UBTFL6P0CB48 400 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 HNRNPCL4P0DMR1 293 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 OR12D1P0DN82 309 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF12P17014 697 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 CCNA2P20248 432 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 CAPZA2P47755 286 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MAP2K6P52564 334 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MVDP53602 400 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 CRISP3P54108 245 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 DSTNP60981 165 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 RPL15P61313 204 aaKnown RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 ARF1P84077 181 aaKnown RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 RELBQ01201 579 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC3A1Q07837 685 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SKP2Q13309 424 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MOGQ16653 247 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MSMPQ1L6U9 139 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SPATS1Q496A3 300 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 DCST2Q5T1A1 773 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 PDZK1Q5T2W1 519 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 NANOGP8Q6NSW7 305 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF620Q6ZNG0 422 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 TRPM8Q7Z2W7 1104 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SERPINA11Q86U17 422 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 GPAT4Q86UL3 456 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MDP1Q86V88 176 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 MYPOPQ86VE0 399 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 CMIPQ8IY22 773 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 FITM2Q8N6M3 262 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 BHLHE22Q8NFJ8 381 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SNX33Q8WV41 574 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SGCDQ92629 289 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 ECSITQ9BQ95 431 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 NANOGQ9H9S0 305 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 FN3KRPQ9HA64 309 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 BCL2L10Q9HD36 194 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 TNFRSF19Q9NS68 423 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC6A13Q9NSD5 602 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 NECAP2Q9NVZ3 263 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC25A37Q9NYZ2 338 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 UBAP1Q9NZ09 502 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SLAMF8Q9P0V8 285 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 TAAR3PQ9P1P4 343 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 P2RX2Q9UBL9 471 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 TAGLN3Q9UI15 199 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF232Q9UNY5 417 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 DSPPQ9NZW4 1301 aa7.67□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC22A23A1A5C7 686 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ISPDA4D126 451 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TRAPPC2LH3BP13 241 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 RPL36A-HNRNPH2H7BZ11 118 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 AIM2O14862 343 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 UPK3AO75631 287 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ATP5HO75947 161 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 VAMP5O95183 116 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 IGHMP01871 453 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 GPIP06744 558 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TFPTP0C1Z6 253 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 PPIAL4GP0DN37 164 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 NR2F1P10589 423 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 IMPDH2P12268 514 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF35P13682 527 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ETS2P15036 469 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 CALB2P22676 271 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 SLC6A2P23975 617 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 SELENOPP49908 381 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 HPCAP84074 193 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ROR2Q01974 943 aaKnown RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF141Q15928 474 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ALKBH6Q3KRA9 238 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 GPAT3Q53EU6 434 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 FAM209AQ5JX71 171 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 INTS11Q5TA45 600 aaKnown RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 REEP3Q6NUK4 255 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 NIPAL3Q6P499 406 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TNFAIP8L2Q6P589 184 aaPredicted RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ERICH5Q6P6B1 374 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 ZNF771Q7L3S4 317 aaPredicted RBP7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 JAZF1Q86VZ6 243 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 MSRB3Q8IXL7 192 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 CLEC4FQ8N1N0 589 aa7.66□□□□□ -1.18
VPS9D1-205ENST00000565452 TMEM86BQ8N661 226 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms