RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 FBN3Q75N90 2809 aa10.5□□□□□ -0.73
GTF3C1-204ENST00000564664 A0A1W2PRG6 482 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 BBIP1A8MTZ0 92 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 LILRA1O75019 489 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 SEC14L2O76054 403 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 MT-ND1P03886 318 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 OPN1SWP03999 348 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 THY1P04216 161 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 IGFBP1P08833 259 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 PCMT1P22061 227 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 IGFBP5P24593 272 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 MAPRE2Q15555 327 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 MOGQ16653 247 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC36A2Q495M3 483 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 RBM45Q8IUH3 476 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 CDK20Q8IZL9 346 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 ZCCHC24Q8N2G6 241 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 OR4D11Q8NGI4 311 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 VANGL1Q8TAA9 524 aaPredicted RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 LIPHQ8WWY8 451 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 LRRC58Q96CX6 371 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 MS4A3Q96HJ5 214 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 REPIN1Q9BWE0 567 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 MRPL37Q9BZE1 423 aaKnown RBP10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 CHODLQ9H9P2 273 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEM38BQ9NVV0 291 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 AP3M1Q9Y2T2 418 aa10.49□□□□□ -0.73
GTF3C1-204ENST00000564664 NPIPB13A6NJU9 1138 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 NPIPB4C9JG80 1138 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 BLOC1S5-TXNDC5H3BN57 136 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 FBP2O00757 339 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 SERPINI2O75830 405 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 OR5F1O95221 314 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 QDPRP09417 244 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 PGA4P0DJD7 388 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 PGA3P0DJD8 388 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 UMPSP11172 480 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 NR2C1P13056 603 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 FUT1P19526 365 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 IFNA8P32881 189 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 RAD52P43351 418 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 DAP3P51398 398 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF84P51523 738 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 CLRN1P58418 232 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 RAB39AQ14964 217 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 TAF11Q15544 211 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 LIPNQ5VXI9 398 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 NANOGNBQ7Z5D8 188 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 CALHM3Q86XJ0 350 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 WDFY1Q8IWB7 410 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 PHC2Q8IXK0 858 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 C1orf174Q8IYL3 243 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 LRRC17Q8N6Y2 441 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 ARIH2OSQ8N7S6 290 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 PCYOX1LQ8NBM8 494 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 RDH5Q92781 318 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 THOC1Q96FV9 657 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 SEPHS2Q99611 448 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 PRSS27Q9BQR3 290 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 MRPL13Q9BYD1 178 aaKnown RBP10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 KCNN2Q9H2S1 579 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 GID8Q9NWU2 228 aa10.48□□□□□ -0.73
GTF3C1-204ENST00000564664 CUBNO60494 3623 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 IQCMA0A1B0GVH7 501 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 GMNCA6NCL1 334 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 B4DSR2 109 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 HAX1O00165 279 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SNAP29O95721 258 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 TSPAN19P0C672 248 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 TROVE2P10155 538 aaKnown RBP eCLIP10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ACADSP16219 412 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ACHEP22303 614 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 APEX1P27695 318 aaKnown RBP10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF133P52736 654 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 CRYBA2P53672 197 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 TAS2R41P59536 307 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 PLP2Q04941 152 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 RGS7BPQ6MZT1 257 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 UNQ6126/PRO20091Q6UXV3 157 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC16A14Q7RTX9 510 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 CARM1Q86X55 608 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF584Q8IVC4 421 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SLC30A7Q8NEW0 376 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF519Q8TB69 540 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEM239Q8WW34 195 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 C11orf40Q8WZ69 217 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 MCHR2Q969V1 340 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SGTBQ96EQ0 304 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 ZNF583Q96ND8 569 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 BCL2L14Q9BZR8 327 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 RNF121Q9H920 327 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SIAEQ9HAT2 523 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SMURF2Q9HAU4 748 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 MEPEQ9NQ76 525 aaPredicted RBP10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 INIPQ9NRY2 104 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 SLCO1C1Q9NYB5 712 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 DUSP13Q9UII6 198 aa10.47□□□□□ -0.73
GTF3C1-204ENST00000564664 TMEFF2Q9UIK5 374 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms