RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 CISD2Q8N5K1 135 aaKnown RBP9.03□□□□□ -0.96
SMG1-208ENST00000563448 NOXO1Q8NFA2 376 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 OR2T4Q8NH00 348 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ZMYND19Q96E35 227 aaPredicted RBP9.03□□□□□ -0.96
SMG1-208ENST00000563448 OR2M2Q96R28 347 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ALG12Q9BV10 488 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 ADGRL4Q9HBW9 690 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 MOKQ9UQ07 419 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 SNX5Q9Y5X3 404 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 COMMD3-BMI1R4GMX3 469 aa9.03□□□□□ -0.96
SMG1-208ENST00000563448 IGKV3D-15A0A087WSY6 115 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 IGLV1-36A0A0B4J1U3 117 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 IRGMA1A4Y4 181 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 RAB36O95755 333 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 FADS2O95864 444 aaKnown RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 GPANK1O95872 356 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TGM6O95932 706 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 IGHG1P01857 330 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 MRPL3P09001 348 aaKnown RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 SELENOPP49908 381 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TDGF1P3P51864 188 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 CLRN1P58418 232 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 GGTLC2Q14390 218 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 PHYHD1Q5SRE7 291 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 LCN1P1Q5VSP4 162 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 XAF1Q6GPH4 301 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 KCTD8Q6ZWB6 473 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 HDDC2Q7Z4H3 204 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TMEM123Q8N131 208 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 PROKR2Q8NFJ6 384 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 OR5M9Q8NGP3 310 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TMEM54Q969K7 222 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 NMD3Q96D46 503 aaKnown RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 CDCA4Q9BXL8 241 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 PRRG4Q9BZD6 226 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 RERGLQ9H628 205 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TAS2R16Q9NYV7 291 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 DIMT1Q9UNQ2 313 aaKnown RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 PCDHGB1Q9Y5G3 927 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 ATMQ13315 3056 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 OR14I1A6ND48 311 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 CENPBD1B2RD01 187 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 IGHA1P01876 353 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 SBK2P0C263 348 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 KRTCAP3Q53RY4 240 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 TEX19Q8NA77 164 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 SMAP2Q8WU79 429 aaPredicted RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 FAR1Q8WVX9 515 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 MCHR2Q969V1 340 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 FOXN4Q96NZ1 517 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 RACGAP1Q9H0H5 632 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 SLC25A18Q9H1K4 315 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 CLCF1Q9UBD9 225 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 CLEC2DQ9UHP7 191 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 COA3Q9Y2R0 106 aaPredicted RBP9.02□□□□□ -0.97
SMG1-208ENST00000563448 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
SMG1-208ENST00000563448 SHANK1Q9Y566 2161 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 TVP23AA6NH52 213 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 SLC22A20A6NK97 555 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 SELENOFO60613 162 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 TFP02787 698 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 DCKP27707 260 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 CRABP1P29762 137 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 PTGS2P35354 604 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ATP6V1E1P36543 226 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ALDH3B2P48448 385 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ETV1P50549 477 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 HCCSP53701 268 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 POU4F2Q12837 409 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 NEDD8Q15843 81 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
SMG1-208ENST00000563448 THEM4Q5T1C6 240 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 RNLSQ5VYX0 342 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 LRFN4Q6PJG9 635 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 SLC25A47Q6Q0C1 308 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 AAED1Q7RTV5 226 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 TUSC5Q8IXB3 177 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 TMEM45BQ96B21 275 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 SNRNP40Q96DI7 357 aaKnown RBP9.01□□□□□ -0.97
SMG1-208ENST00000563448 RBP7Q96R05 134 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 TRIB1Q96RU8 372 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ZNF649Q9BS31 505 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 MARCH7Q9H992 704 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 RNF122Q9H9V4 155 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 BCO1Q9HAY6 547 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ACOT13Q9NPJ3 140 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 GLTPQ9NZD2 209 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 KLHL9Q9P2J3 617 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 FOXD3Q9UJU5 478 aaPredicted RBP9.01□□□□□ -0.97
SMG1-208ENST00000563448 CLEC4AQ9UMR7 237 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 RCE1Q9Y256 329 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 INTS1Q8N201 2190 aaKnown RBP9.01□□□□□ -0.97
SMG1-208ENST00000563448 PIEZO2Q9H5I5 2752 aa9.01□□□□□ -0.97
SMG1-208ENST00000563448 ZNF724A8MTY0 619 aa9□□□□□ -0.97
SMG1-208ENST00000563448 GPR171O14626 319 aa9□□□□□ -0.97
SMG1-208ENST00000563448 AKAP8O43823 692 aaKnown RBP9□□□□□ -0.97
SMG1-208ENST00000563448 KHDRBS3O75525 346 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms