RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CLEC20AQ6ZU45 233 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 UBL7Q96S82 380 aaPredicted RBP5.79□□□□□ -1.48
CLK3-212ENST00000563418 NRIP2Q9BQI9 281 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 TUBA4BQ9H853 241 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 Q9N2K0 584 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 UQCR10Q9UDW1 63 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 DVL2O14641 736 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 TACR2P21452 398 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 HIST3H3Q16695 136 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 FNDC3BQ53EP0 1204 aaKnown RBP5.79□□□□□ -1.48
CLK3-212ENST00000563418 C8orf82Q6P1X6 216 aaPredicted RBP5.79□□□□□ -1.48
CLK3-212ENST00000563418 WDR73Q6P4I2 378 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 OR5L1Q8NGL2 311 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 ACER1Q8TDN7 264 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 CNIH4Q9P003 139 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 A8MVM7 634 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 KCNAB3O43448 404 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 ADRA2CP18825 462 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 NDUFS1P28331 727 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 PIN1Q13526 163 aaPredicted RBP5.79□□□□□ -1.48
CLK3-212ENST00000563418 IRF3Q14653 427 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 SLC35D3Q5M8T2 416 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 SDR9C7Q8NEX9 313 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 A4GNTQ9UNA3 340 aa5.79□□□□□ -1.48
CLK3-212ENST00000563418 MARCH11A6NNE9 402 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 YJEFN3A6XGL0 299 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 OR1F1O43749 312 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 MSCO60682 206 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 LRP3O75074 770 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ITGB2P05107 769 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ELFN1P0C7U0 828 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ACRV1P26436 265 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PDE7AQ13946 482 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 FFAR4Q5NUL3 377 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PTOV1Q86YD1 416 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 OR4K13Q8NH42 304 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 CMTM2Q8TAZ6 248 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC22A12Q96S37 553 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SMIM7Q9BQ49 75 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC46A2Q9BY10 475 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 OR52D1Q9H346 318 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 RAB18Q9NP72 206 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 ZNF749O43361 778 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 CKMP06732 381 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ARRB1P49407 418 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 PRSS35Q8N3Z0 413 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 NUDT10Q8NFP7 164 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 TSTD1Q8NFU3 115 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 C2orf50Q96LR7 162 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 C5orf34Q96MH7 638 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 MTHFD2LQ9H903 347 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 TDP1Q9NUW8 608 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PPP6CO00743 305 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ST8SIA3O43173 380 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SELENOFO60613 162 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ASGR1P07306 291 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC11A1P49279 550 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 DIO1P49895 249 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SURF2Q15527 256 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 BEND2Q8NDZ0 799 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ZCCHC10Q8TBK6 192 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC22A18Q96BI1 424 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 NTNG2Q96CW9 530 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 FOXN4Q96NZ1 517 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 G6PC3Q9BUM1 346 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ENY2Q9NPA8 101 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 RCC2Q9P258 522 aaKnown RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 USP22Q9UPT9 525 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 MOKQ9UQ07 419 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ANKRD61A6NGH8 418 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PRAMEF11O60813 436 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 GPR32O75388 356 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PMP2P02689 132 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ATP1B2P14415 290 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 DUSP1P28562 367 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 PPM1AP35813 382 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 NFATC2Q13469 925 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ELOBQ15370 118 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 TMEM35AQ53FP2 167 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 RAB8BQ92930 207 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 KCNJ15Q99712 375 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 MACROD1Q9BQ69 325 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 OR10A5Q9H207 317 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC39A9Q9NUM3 307 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SIDT1Q9NXL6 827 aaKnown RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 NDOR1Q9UHB4 597 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 RAB22AQ9UL26 194 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 CLDN16Q9Y5I7 305 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 MMP24Q9Y5R2 645 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 ERVFC1-1P60608 527 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 SLC9A3R2Q15599 337 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 TMEM179BQ7Z7N9 219 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 TMEM229BQ8NBD8 167 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 CD200R1Q8TD46 325 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 FAM3DQ96BQ1 224 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 ING1Q9UK53 422 aaPredicted RBP5.78□□□□□ -1.48
CLK3-212ENST00000563418 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
CLK3-212ENST00000563418 HEBP2Q9Y5Z4 205 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms