RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 AAED1Q7RTV5 226 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 CPOQ8IVL8 374 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 TUSC5Q8IXB3 177 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 LRR1Q96L50 414 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 ZFP3Q96NJ6 502 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 ALG12Q9BV10 488 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 CLN6Q9NWW5 311 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 UBAP1Q9NZ09 502 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 GPR52Q9Y2T5 361 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 FAM215AQ9Y5M1 114 aa13.08□□□□□ -0.32
CDH11-207ENST00000563255 INTS1Q8N201 2190 aaKnown RBP13.07□□□□□ -0.32
CDH11-207ENST00000563255 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 M0R129 80 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 NR2C1P13056 603 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 NTF4P34130 210 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 CSNK2BP67870 215 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 RUNX1T1Q06455 604 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 CAMK2DQ13557 499 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 GUSBP1Q15486 140 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 THEM4Q5T1C6 240 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 CXXC5Q7LFL8 322 aaKnown RBP13.07□□□□□ -0.32
CDH11-207ENST00000563255 WDFY1Q8IWB7 410 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 TMEM123Q8N131 208 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 C9orf106Q8NAJ2 232 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 CNIH3Q8TBE1 160 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 RBP7Q96R05 134 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 OR2M2Q96R28 347 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 H2AFY2Q9P0M6 372 aaPredicted RBP13.07□□□□□ -0.32
CDH11-207ENST00000563255 AASSQ9UDR5 926 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 NOSIPQ9Y314 301 aaKnown RBP13.07□□□□□ -0.32
CDH11-207ENST00000563255 FKBP7Q9Y680 259 aa13.07□□□□□ -0.32
CDH11-207ENST00000563255 SLC22A23A1A5C7 686 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 OR6C65A6NJZ3 312 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 FAM183AA6NL82 134 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SNTNA6NMZ2 147 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SLC43A1O75387 559 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 MRPL33O75394 65 aaKnown RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 CRHP06850 196 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SLC2A5P22732 501 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 CRABP1P29762 137 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 AGTR1P30556 359 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SELENOPP49908 381 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 ZNF133P52736 654 aaPredicted RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 CLRN1P58418 232 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 TMED1Q13445 227 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SLC35D3Q5M8T2 416 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 LAIR2Q6ISS4 152 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 B3GNT6Q6ZMB0 384 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 SEM1Q6ZVN7 128 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 ZBTB46Q86UZ6 589 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 GID4Q8IVV7 300 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 C20orf196Q8IYI0 205 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 CYB561A3Q8NBI2 242 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 NOXO1Q8NFA2 376 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 RFKQ969G6 155 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 TMEM54Q969K7 222 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 ZNF775Q96BV0 537 aaPredicted RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 NMD3Q96D46 503 aaKnown RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 ZNF582Q96NG8 517 aaPredicted RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 YTHDF1Q9BYJ9 559 aaKnown RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 LINC00470Q9BZP3 86 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 PLCXD1Q9NUJ7 323 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 FOXD3Q9UJU5 478 aaPredicted RBP13.06□□□□□ -0.32
CDH11-207ENST00000563255 MOKQ9UQ07 419 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 PCDHGB5Q9Y5G0 923 aa13.06□□□□□ -0.32
CDH11-207ENST00000563255 CSMD1Q96PZ7 3565 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 H7C1C5 153 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 PRODHO43272 600 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 ENTPD6O75354 484 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 IL2RAP01589 272 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 CCDC159P0C7I6 412 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
CDH11-207ENST00000563255 CSNK1A1P48729 337 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 CENPAP49450 140 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 LCN6P62502 163 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 LGALS3BPQ08380 585 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 RBM48Q5RL73 367 aaKnown RBP13.05□□□□□ -0.32
CDH11-207ENST00000563255 DNM1P34Q6PK57 102 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 UGT2A3Q6UWM9 527 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 MEPCEQ7L2J0 689 aaKnown RBP13.05□□□□□ -0.32
CDH11-207ENST00000563255 FAM214BQ7L5A3 538 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 OR2T4Q8NH00 348 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 HCAR1Q9BXC0 346 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 SYT4Q9H2B2 425 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 RPRD1BQ9NQG5 326 aaKnown RBP13.05□□□□□ -0.32
CDH11-207ENST00000563255 GLTPQ9NZD2 209 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 DNAJC27Q9NZQ0 273 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH11-207ENST00000563255 CLEC4AQ9UMR7 237 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 B9D1Q9UPM9 204 aa13.05□□□□□ -0.32
CDH11-207ENST00000563255 SLC22A31A6NKX4 558 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms