RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ITIH4Q14624 930 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CYTH1Q15438 398 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CAVIN4Q5BKX8 364 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 C9orf129Q5T035 196 aaKnown RBP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 OR52W1Q6IF63 320 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 C12orf54Q6X4T0 127 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 MMAAQ8IVH4 418 aaKnown RBP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 C11orf53Q8IXP5 236 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 FBXL13Q8NEE6 735 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 OR51S1Q8NGJ8 323 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 LYPD6BQ8NI32 183 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 RHEBL1Q8TAI7 183 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ACER1Q8TDN7 264 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 GSDMAQ96QA5 445 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SRMSQ9H3Y6 488 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ELOVL6Q9H5J4 265 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CLMPQ9H6B4 373 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 AUNIPQ9H7T9 357 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC25A22Q9H936 323 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SLCO1B3Q9NPD5 702 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 LYARQ9NX58 379 aaKnown RBP2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 MTCH1Q9NZJ7 389 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 DCDC2Q9UHG0 476 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 GNPTGQ9UJJ9 305 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 ING4Q9UNL4 249 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 N6AMT1Q9Y5N5 214 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 UBN2Q6ZU65 1347 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 SYNRGQ9UMZ2 1314 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 USP47Q96K76 1375 aa2.31□□□□□ -2.04
SHCBP1-202ENST00000563219 CROCCQ5TZA2 2017 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 FAM231BA6NCW3 169 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 HIDE1A8MVS5 230 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 E7ENQ6 273 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 PES1O00541 588 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SIVA1O15304 175 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 HUS1O60921 280 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 EEDO75530 441 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 MMP23AO75900 390 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 CLPXO76031 633 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 OR2F2O95006 317 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 CCNB2O95067 398 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SCELO95171 688 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 FGF1P05230 155 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 UBCP0CG48 685 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 CALM1P0DP23 149 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 CALM2P0DP24 149 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 CALM3P0DP25 149 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 STOMP27105 288 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 PRDX3P30048 256 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC1A1P43005 524 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 GPR6P46095 362 aaPredicted RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 NPBWR2P48146 333 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC11A1P49279 550 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 LYZP61626 148 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 TIMM10P62072 90 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 NRF1Q16656 503 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ZBED5Q49AG3 693 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 PLCXD3Q63HM9 321 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 C11orf71Q6IPW1 123 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ANGPTL8Q6UXH0 198 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 MBOAT1Q6ZNC8 495 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 RNF165Q6ZSG1 346 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SSX9Q7RTT3 188 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 PDIK1LQ8N165 341 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ZADH2Q8N4Q0 377 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 PRELID2Q8N945 189 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 OR52E5Q8NH55 327 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 MARCH1Q8TCQ1 289 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ZNF75CPQ92670 426 aaPredicted RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 RDH5Q92781 318 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 TMEM54Q969K7 222 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ISG20Q96AZ6 181 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 FAM122AQ96E09 287 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 FCRL1Q96LA6 429 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 MAGEB18Q96M61 343 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 TGS1Q96RS0 853 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 RASL11BQ9BPW5 248 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 YTHDF1Q9BYJ9 559 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 C8orf33Q9H7E9 229 aaPredicted RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 ZDHHC11Q9H8X9 412 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 UGT1A7Q9HAW7 530 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 UGT1A8Q9HAW9 530 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 LYRM4Q9HD34 91 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 SH2D2AQ9NP31 389 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 IL17CQ9P0M4 197 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 MYEF2Q9P2K5 600 aaKnown RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 UXTQ9UBK9 157 aaPredicted RBP2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 RHBDD3Q9Y3P4 386 aa2.3□□□□□ -2.04
SHCBP1-202ENST00000563219 TNRQ92752 1358 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 GLYATL1P3A0A0U1RQE8 302 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 LOC100653049A0A140TA62 436 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 EPOPA6NHQ4 379 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 USP27XA6NNY8 438 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 C12orf71A8MTZ7 269 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 A8MUA0 341 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 ERVV-1B6SEH8 477 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 L7N2F9 121 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 SIRPB1O00241 398 aa2.29□□□□□ -2.04
SHCBP1-202ENST00000563219 SLC9A3R1O14745 358 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms