RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CBLN3Q6UW01 205 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 KANSL1Q7Z3B3 1105 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 PRSS35Q8N3Z0 413 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 SPERTQ8NA61 448 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 OR4C16Q8NGL9 310 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 TAAR8Q969N4 342 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
USB1-207ENST00000563149 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
USB1-207ENST00000563149 OR8B4Q96RC9 309 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 GINS4Q9BRT9 223 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 CHRNA10Q9GZZ6 450 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 RDH8Q9NYR8 311 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 ZNF224Q9NZL3 707 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 ING1Q9UK53 422 aaPredicted RBP11.85□□□□□ -0.51
USB1-207ENST00000563149 MMP17Q9ULZ9 603 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 PIAS3Q9Y6X2 628 aa11.85□□□□□ -0.51
USB1-207ENST00000563149 TRAV36DV7A0A075B6V5 113 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SLC17A2O00624 439 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MT-ATP6P00846 226 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 IGLV3-19P01714 112 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 BGLAPP02818 100 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 TMIGD3P0DMS9 266 aaPredicted RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 VSIG10L2P0DP72 767 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 PTHLHP12272 177 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 PPP3CBP16298 524 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SDHBP21912 280 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MST1P26927 711 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 PRSS3P35030 304 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 KIR3DL2P43630 455 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 DCAF7P61962 342 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SLC17A1Q14916 467 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 ZNF542PQ5EBM4 170 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 TEX30Q5JUR7 227 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 OR5M10Q6IEU7 315 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 FAAP20Q6NZ36 180 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MSANTD3Q96H12 275 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MAP3K3Q99759 626 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 WBP1LQ9NX94 342 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 UPB1Q9UBR1 384 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 OPN4Q9UHM6 478 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SESN1Q9Y6P5 492 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 A0A087WV48 116 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 LOC100289279A0A1B0GTE1 492 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 A0A1W2PQD3 144 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 FITM1A5D6W6 292 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 XKRYO14609 159 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SUSD5O60279 629 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 EIF4E2O60573 245 aaKnown RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 RP2O75695 350 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 PROS1P07225 676 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 CXCR1P25024 350 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 CAPZBP47756 277 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 FASLGP48023 281 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 GMFBP60983 142 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 C1orf61Q13536 156 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 HLXQ14774 488 aaPredicted RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 RAB11BQ15907 218 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 CSRP2Q16527 193 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 WDR38Q5JTN6 314 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 FAM166AQ6J272 317 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 TMEM65Q6PI78 240 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MAMDC2Q7Z304 686 aaPredicted RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 CDH26Q8IXH8 852 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 ZNF679Q8IYX0 411 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 OR2AK2Q8NG84 335 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 OR51D1Q8NGF3 324 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 SCARB1Q8WTV0 552 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 PTPMT1Q8WUK0 201 aaPredicted RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 TSEN15Q8WW01 171 aaKnown RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 LMF1Q96S06 567 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 NXF5Q9H1B4 397 aaKnown RBP11.84□□□□□ -0.51
USB1-207ENST00000563149 SYT4Q9H2B2 425 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 MED11Q9P086 117 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 EPHA6Q9UF33 1036 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 B9D1Q9UPM9 204 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 HEATR5AQ86XA9 2040 aa11.84□□□□□ -0.51
USB1-207ENST00000563149 EML5Q05BV3 1969 aa11.83□□□□□ -0.51
USB1-207ENST00000563149 A0A1B0GTH9 108 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 LILRA5A6NI73 299 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 B4DGG1 531 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 CHURC1-FNTBB4DL54 471 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 F5H5P2 479 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 H7C1C5 153 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 BET1O15155 118 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 CD37P11049 281 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 GTF2F2P13984 249 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ZP3P21754 424 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 CD1CP29017 333 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 POU3F4P49335 361 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 FNTBP49356 437 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ACTBP60709 375 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 LCN6P62502 163 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ACTG1P63261 375 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 ROM1Q03395 351 aa11.83□□□□□ -0.52
USB1-207ENST00000563149 SGCBQ16585 318 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms