RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 NDUFB10O96000 172 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 ABOP16442 354 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 TBPP20226 339 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 FDFT1P37268 417 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 CRYBB2P43320 205 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 PRMT2P55345 433 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 REG3AQ06141 175 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 NRF1Q16656 503 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 PRAMEF20Q5VT98 475 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 NIPA1Q7RTP0 329 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 RAB3IL1Q8TBN0 382 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 ACOT11Q8WXI4 607 aaPredicted RBP4.27□□□□□ -1.73
SMG1-204ENST00000561940 FGF14Q92915 247 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 RASD2Q96D21 266 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 SRMSQ9H3Y6 488 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 NXF3Q9H4D5 531 aaKnown RBP4.27□□□□□ -1.73
SMG1-204ENST00000561940 SIAEQ9HAT2 523 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 CTNNA3Q9UI47 895 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 TMEM131LA2VDJ0 1609 aa4.27□□□□□ -1.73
SMG1-204ENST00000561940 DHX57Q6P158 1386 aaKnown RBP4.27□□□□□ -1.73
SMG1-204ENST00000561940 CTAGE15A4D2H0 777 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 GOSR2O14653 212 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 IGLV1-47P01700 117 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 SERPIND1P05546 499 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 CHMLP26374 656 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 ATP5C1P36542 298 aaKnown RBP4.26□□□□□ -1.73
SMG1-204ENST00000561940 NUP107P57740 925 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 KCNJ2P63252 427 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 CYTH1Q15438 398 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 HSP90AB3PQ58FF7 597 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 ACP7Q6ZNF0 438 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 SLC25A48Q6ZT89 311 aaKnown RBP4.26□□□□□ -1.73
SMG1-204ENST00000561940 CTAGE6Q86UF2 777 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 THOC6Q86W42 341 aaKnown RBP4.26□□□□□ -1.73
SMG1-204ENST00000561940 PLA2G4DQ86XP0 818 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 SORT1Q99523 831 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 NUP58Q9BVL2 599 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 TMEM59Q9BXS4 323 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 HES7Q9BYE0 225 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 DEFB127Q9H1M4 99 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 CCL28Q9NRJ3 127 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 INPP5EQ9NRR6 644 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 PSMC3IPQ9P2W1 217 aaPredicted RBP4.26□□□□□ -1.73
SMG1-204ENST00000561940 CDC42BPAQ5VT25 1732 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 ARHGEF10O15013 1369 aa4.26□□□□□ -1.73
SMG1-204ENST00000561940 CDHR2Q9BYE9 1310 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 OR2AG2A6NM03 316 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 KLF8O95600 359 aaPredicted RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 IGHV2-5P01817 119 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 CRYGBP07316 175 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 GIPP09681 153 aaPredicted RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 PABPC4LP0CB38 370 aaKnown RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 ICAM2P13598 275 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 VHLP40337 213 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 YAP1P46937 504 aaKnown RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 UNC119Q13432 240 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 CUL2Q13617 745 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 KIAA0087Q14695 138 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 LTBP1Q14766 1721 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 TMEM107Q6UX40 140 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 PUSL1Q8N0Z8 303 aaKnown RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 PLPPR1Q8TBJ4 325 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 NDRG1Q92597 394 aaKnown RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 MYDGFQ969H8 173 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 ROGDIQ9GZN7 287 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 CALYQ9NYX4 217 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 RRBP1Q9P2E9 1410 aaKnown RBP4.25□□□□□ -1.73
SMG1-204ENST00000561940 SBNO1A3KN83 1393 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 KIF15Q9NS87 1388 aa4.25□□□□□ -1.73
SMG1-204ENST00000561940 CCDC144AA2RUR9 1427 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 EEA1Q15075 1411 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 HEATR9A2RTY3 570 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 GJE1A6NN92 205 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 MCF2P10911 925 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 ZNF17P17021 662 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 SLC2A5P22732 501 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 PRDX3P30048 256 aaKnown RBP4.24□□□□□ -1.73
SMG1-204ENST00000561940 NPBWR2P48146 333 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 CKAP4Q07065 602 aaKnown RBP4.24□□□□□ -1.73
SMG1-204ENST00000561940 SRSF5Q13243 272 aaKnown RBP4.24□□□□□ -1.73
SMG1-204ENST00000561940 SLC22A8Q8TCC7 542 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 HSFY1Q96LI6 401 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 RIOK2Q9BVS4 552 aaKnown RBP4.24□□□□□ -1.73
SMG1-204ENST00000561940 OR11A1Q9GZK7 315 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 ANKRA2Q9H9E1 313 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 MMP26Q9NRE1 261 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 STARD10Q9Y365 291 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 SLC25A15Q9Y619 301 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
SMG1-204ENST00000561940 ATRXP46100 2492 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 LMTK2Q8IWU2 1503 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 CCL21O00585 134 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 RNF13O43567 381 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 INSP01308 110 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 FGF1P05230 155 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 CCNA1P78396 465 aa4.23□□□□□ -1.73
SMG1-204ENST00000561940 TGM3Q08188 693 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms