RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 HSF2Q03933 536 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 CAMK2DQ13557 499 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MED22Q15528 200 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 FREM1Q5H8C1 2179 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 SYT6Q5T7P8 510 aaPredicted RBP9.18□□□□□ -0.94
USP3-219ENST00000561326 UBE2UQ5VVX9 321 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 XAF1Q6GPH4 301 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 FAM180AQ6UWF9 173 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 B3GNT6Q6ZMB0 384 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 ZNF367Q7RTV3 350 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 SLC16A9Q7RTY1 509 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 LHFPL3Q86UP9 236 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 SATL1Q86VE3 508 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MCEMP1Q8IX19 187 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 KLHL36Q8N4N3 616 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 OR10H4Q8NGA5 316 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 OR51L1Q8NGJ5 315 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 OR6N1Q8NGY5 312 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 FAR1Q8WVX9 515 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MUL1Q969V5 352 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 DGCR14Q96DF8 476 aaKnown RBP9.18□□□□□ -0.94
USP3-219ENST00000561326 WDYHV1Q96HA8 205 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 TSSK2Q96PF2 358 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MNTQ99583 582 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 EMC6Q9BV81 110 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 JAM3Q9BX67 310 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 MRPL13Q9BYD1 178 aaKnown RBP9.18□□□□□ -0.94
USP3-219ENST00000561326 YIPF3Q9GZM5 350 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 TP53TG5Q9Y2B4 290 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 TMEM14AQ9Y6G1 99 aa9.18□□□□□ -0.94
USP3-219ENST00000561326 IGF2RP11717 2491 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 DOCK7Q96N67 2140 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 CCDC160A6NGH7 325 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 OR6C65A6NJZ3 312 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 C12orf71A8MTZ7 269 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ZNF670-ZNF695F2Z2N8 137 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 TAF4O00268 1085 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 RAMP1O60894 148 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 TMCC2O75069 709 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 SLC43A1O75387 559 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 APOL3O95236 402 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 PDGFAP04085 211 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 PGA4P0DJD7 388 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 PGA3P0DJD8 388 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 SFTPCP11686 197 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 FCGR2AP12318 317 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ZNF823P16415 610 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 CSNK1A1P48729 337 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ETV1P50549 477 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 RUNX1T1Q06455 604 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 GALEQ14376 348 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 RAB39AQ14964 217 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 SPHARQ15513 63 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ABLIM2Q6H8Q1 611 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 B3GLCTQ6Y288 498 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 SHFQ7M4L6 423 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 AAED1Q7RTV5 226 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 EGFL6Q8IUX8 553 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ERI1Q8IV48 349 aaKnown RBP9.17□□□□□ -0.94
USP3-219ENST00000561326 SLC35F2Q8IXU6 374 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ZPLD1Q8TCW7 415 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 KISS1RQ969F8 398 aaPredicted RBP9.17□□□□□ -0.94
USP3-219ENST00000561326 ZNF845Q96IR2 970 aaPredicted RBP9.17□□□□□ -0.94
USP3-219ENST00000561326 COG8Q96MW5 612 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 TAAR6Q96RI8 345 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 INTS14Q96SY0 518 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 RNF122Q9H9V4 155 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ADGRL4Q9HBW9 690 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 GP6Q9HCN6 339 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 B3GAT2Q9NPZ5 323 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 ERVK13-1Q9NX77 482 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 GLTPQ9NZD2 209 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 RCE1Q9Y256 329 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 CAB39Q9Y376 341 aaPredicted RBP9.17□□□□□ -0.94
USP3-219ENST00000561326 ZNF175Q9Y473 711 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 LIPGQ9Y5X9 500 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 PIEZO2Q9H5I5 2752 aa9.17□□□□□ -0.94
USP3-219ENST00000561326 LOC400499M0QZD8 3231 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 IGKV3D-15A0A087WSY6 115 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 IGLV1-36A0A0B4J1U3 117 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 SLC22A20A6NK97 555 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ZNF716A6NP11 495 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 ZNF724A8MTY0 619 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 FAM171A2A8MVW0 826 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 AHRRA9YTQ3 701 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 J3QRE1 110 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 K7EM74 188 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 DCTN6O00399 190 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 PHYHO14832 338 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 NOL3O60936 208 aaKnown RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 MRPL33O75394 65 aaKnown RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 SEC14L2O76054 403 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 INMTO95050 263 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 MRPL3P09001 348 aaKnown RBP9.16□□□□□ -0.94
USP3-219ENST00000561326 QDPRP09417 244 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 TACSTD2P09758 323 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 LIMS3P0CW19 117 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 LIMS4P0CW20 117 aa9.16□□□□□ -0.94
USP3-219ENST00000561326 HSMCR30P0CW71 290 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms