RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 RNF121Q9H920 327 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 TMEM165Q9HC07 324 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 MID1IP1Q9NPA3 183 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 TMEM106BQ9NUM4 274 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 ACOXLQ9NUZ1 547 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 U3KQK5 164 aa7.98□□□□□ -1.13
HERC1-210ENST00000560897 HMX2A2RU54 273 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 PRAMEF27A3QJZ7 478 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CEACAM18A8MTB9 384 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 A8MVM7 634 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 AP3D1O14617 1153 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 TNFRSF13BO14836 293 aaPredicted RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 TSPAN9O75954 239 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 AHSA1O95433 338 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 IGHV3-13P01766 116 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CD33P20138 364 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 TNFSF4P23510 183 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CPT2P23786 658 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 ATP5F1P24539 256 aaPredicted RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 TGFBR2P37173 567 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 LIPAP38571 399 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 FGF12P61328 243 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 NAA20P61599 178 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 RPS26P62854 115 aaKnown RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 TAGLNQ01995 201 aaKnown RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 EMX1Q04741 257 aaPredicted RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 MFSD13AQ14CX5 517 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 MAPK14Q16539 360 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 NSUN5P1Q3KNT7 163 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 C1orf140Q5VVS0 124 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CARD17Q5XLA6 110 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 PGBD2Q6P3X8 592 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 C11orf88Q6PI97 169 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 OLIG3Q7RTU3 272 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 NUDCD3Q8IVD9 361 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 KDM8Q8N371 416 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CCNYL1Q8N7R7 359 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 SPERTQ8NA61 448 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 VPS37AQ8NEZ2 397 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 BHLHE22Q8NFJ8 381 aaPredicted RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 OR5AK3PQ8NH89 298 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 TCP10LQ8TDR4 215 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 SLC25A36Q96CQ1 311 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 R3HDM4Q96D70 268 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 SLC35G5Q96KT7 338 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 ZNF75AQ96N20 296 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 FOXB1Q99853 325 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 PCGF1Q9BSM1 259 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 SSU72Q9NP77 194 aaKnown RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 MED4Q9NPJ6 270 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 C1orf109Q9NX04 203 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 TMEM216Q9P0N5 145 aa7.97□□□□□ -1.13
HERC1-210ENST00000560897 CGGBP1Q9UFW8 167 aaPredicted RBP7.97□□□□□ -1.13
HERC1-210ENST00000560897 KIR2DS1A0A191URI9 304 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 CFAP73A6NFT4 308 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 NPIPB8E9PQR5 432 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 P2RY10O00398 339 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 C6orf47O95873 294 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 AGR2O95994 175 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 PTHP01270 115 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 PNMTP11086 282 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 CCL2P13500 99 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 SDC1P18827 310 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 TNFRSF1AP19438 455 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 MAGEA12P43365 314 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 IER3P46695 156 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 PRKAA2P54646 552 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 UCP2P55851 309 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 COPZ1P61923 177 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 RPL38P63173 70 aaKnown RBP7.96□□□□□ -1.14
HERC1-210ENST00000560897 TNFAIP6P98066 277 aaPredicted RBP7.96□□□□□ -1.14
HERC1-210ENST00000560897 GNA13Q14344 377 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 ZMYND11Q15326 602 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 GSTA3Q16772 222 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 ZNF718Q3SXZ3 478 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 DMRTC1Q5HYR2 192 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 TYW3Q6IPR3 259 aaKnown RBP7.96□□□□□ -1.14
HERC1-210ENST00000560897 TMEM53Q6P2H8 277 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 UNQ6126/PRO20091Q6UXV3 157 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 FRRS1Q6ZNA5 592 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 NLRC3Q7RTR2 1065 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 PIWIL3Q7Z3Z3 882 aaKnown RBP7.96□□□□□ -1.14
HERC1-210ENST00000560897 NATD1Q8N6N6 113 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 OR8B3Q8NGG8 313 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 OR1J1Q8NGS3 322 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 OXGR1Q96P68 337 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 OR2M2Q96R28 347 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 OR8B2Q96RD0 313 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 ULBP2Q9BZM5 246 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 POLE3Q9NRF9 147 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 ATAD3AQ9NVI7 634 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 ZDHHC8Q9ULC8 765 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 FAM96BQ9Y3D0 163 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 USH1CQ9Y6N9 552 aa7.96□□□□□ -1.14
HERC1-210ENST00000560897 A0A096LPI6 279 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 LCE6AA0A183 80 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 IQCMA0A1B0GVH7 501 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 WDR91A4D1P6 747 aa7.95□□□□□ -1.14
HERC1-210ENST00000560897 ZSCAN5BA6NJL1 495 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms