RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 HCAR1Q9BXC0 346 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 DPH1Q9BZG8 443 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 C20orf85Q9H1P6 137 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MED28Q9H204 178 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ABCG5Q9H222 651 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PPIL3Q9H2H8 161 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 LINC00597Q9H2U6 94 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 OR51J1Q9H342 316 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LRRN3Q9H3W5 708 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 KLHL31Q9H511 634 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CDCP1Q9H5V8 836 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NARFLQ9H6Q4 476 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 KIR3DX1Q9H7L2 352 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ISG20L2Q9H9L3 353 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D17Q9HA65 648 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ADGRL4Q9HBW9 690 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 MRPS30Q9NP92 439 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 NANSQ9NR45 359 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CTPS2Q9NRF8 586 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 POLE3Q9NRF9 147 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 IMP3Q9NV31 184 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 MED9Q9NWA0 146 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 BABAM2Q9NXR7 383 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 KLHL28Q9NXS3 571 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NLGN3Q9NZ94 848 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 GLTPQ9NZD2 209 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ABRACLQ9P1F3 81 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 LPAR3Q9UBY5 353 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 KCNN3Q9UGI6 736 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 APOBEC3BQ9UH17 382 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 SCP2D1Q9UJQ7 156 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC13A4Q9UKG4 626 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 FBXL3Q9UKT7 428 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ACSL5Q9ULC5 683 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC7A7Q9UM01 511 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SPATA2Q9UM82 520 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ING4Q9UNL4 249 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 RASD1Q9Y272 281 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NCKAP1Q9Y2A7 1128 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC17A4Q9Y2C5 497 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 SLC35A3Q9Y2D2 325 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 NTNG1Q9Y2I2 539 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 ATG4BQ9Y4P1 393 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PCDHGA9Q9Y5G4 932 aaKnown RBP2.23□□□□□ -2.05
SPG11-223ENST00000560858 FKBP7Q9Y680 259 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 CSNK1G3Q9Y6M4 447 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 U3KQ87 197 aa2.23□□□□□ -2.05
SPG11-223ENST00000560858 PHF3Q92576 2039 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 THADAQ6YHU6 1953 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 KIAA1549Q9HCM3 1950 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TBC1D3EA0A087X179 549 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ARPC4-TTLL3A0A0A6YYG9 625 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 A0A0B4J2E0 115 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 TEX13CA0A0J9YWL9 993 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 A0A1B0GX12 115 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 hCG_1807616A0A1W2PRN6 198 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DAPL1A0PJW8 107 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 OR2M5A3KFT3 312 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ANTXRLA6NF34 631 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 NAP1L6A6NFF2 107 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZSCAN5BA6NJL1 495 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GLOD5A6NK44 160 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FAM183AA6NL82 134 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DUXAA6NLW8 204 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RIIAD1A6NNX1 92 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 HSPB2A8KAH6 182 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 E9PI62 339 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 NPIPB9F8W1W9 429 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SMLR1H3BR10 107 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GABARAPH6UMI1 98 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 AIPO00170 330 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 BTN3A3O00478 584 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GPR171O14626 319 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 BET1O15155 118 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 FLRT2O43155 660 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 EEF1E1O43324 174 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 SULT1B1O43704 296 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GPRIN2O60269 458 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GALR3O60755 368 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 STX11O75558 287 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ERAL1O75616 437 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 B3GALNT1O75752 331 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ARL6IP5O75915 188 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RCBTB2O95199 551 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 MPC2O95563 127 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 SERPINA3P01011 423 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IGF2P01344 180 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IFNA7P01567 189 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 WNT1P04628 370 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ATP1B1P05026 303 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IL5P05113 134 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 PCCBP05166 539 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 DBIP07108 87 aaKnown RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 GRPP07492 148 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 GIPP09681 153 aaPredicted RBP2.22□□□□□ -2.05
SPG11-223ENST00000560858 C8orf89P0DMQ9 161 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 RRASP10301 218 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 UBL4AP11441 157 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 IFI30P13284 250 aa2.22□□□□□ -2.05
SPG11-223ENST00000560858 ZNF3P17036 446 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms