RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 NOXO1Q8NFA2 376 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 ZNF519Q8TB69 540 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 MCHR2Q969V1 340 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 CCDC124Q96CT7 223 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 RADILQ96JH8 1075 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 KCNK17Q96T54 332 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 FOXB1Q99853 325 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 MAGIXQ9H6Y5 334 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 SEC61A2Q9H9S3 476 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 NOX3Q9HBY0 568 aa13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
SNRPA1-213ENST00000560856 IGKV1D-43A0A0B4J1Z2 117 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 CD8AP01732 235 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 SOD3P08294 240 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 CD14P08571 375 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 B4GALT1P15291 398 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 MYBPC1Q00872 1141 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 DNAL1Q4LDG9 190 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 C10orf128Q5T292 105 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 THSD4Q6ZMP0 1018 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 FAM122BQ7Z309 247 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 MDP1Q86V88 176 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 MYPOPQ86VE0 399 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 OR4C15Q8NGM1 316 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 FGFBP3Q8TAT2 258 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 PIGTQ969N2 578 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 FBXW5Q969U6 566 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 SLC38A2Q96QD8 506 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 TSPAN32Q96QS1 320 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 CADM1Q9BY67 442 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 TMEM38BQ9NVV0 291 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 CISD1Q9NZ45 108 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 UGT2A1Q9Y4X1 527 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 LYVE1Q9Y5Y7 322 aa13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
SNRPA1-213ENST00000560856 OVOL3O00110 214 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 GSC2O15499 205 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 HLA-HP01893 362 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CELA3BP08861 270 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CECR9P0C854 216 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CDH11P55287 796 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CLRN1P58418 232 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ERVK-25P63136 954 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 SLC25A47Q6Q0C1 308 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 SLC22A25Q6T423 547 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 HDDC2Q7Z4H3 204 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 SKA3Q8IX90 412 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ADGRG5Q8IZF4 528 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 PIAS4Q8N2W9 510 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CLDN22Q8N7P3 220 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ARIH2OSQ8N7S6 290 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 SMAP2Q8WU79 429 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 HTRA1Q92743 480 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 RSRC1Q96IZ7 334 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 GPX7Q96SL4 187 aaPredicted RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 CCL19Q99731 98 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ALG12Q9BV10 488 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 KATNB1Q9BVA0 655 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 STX18Q9P2W9 335 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ADAM18Q9Y3Q7 739 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 ACANP16112 2415 aa13.28□□□□□ -0.28
SNRPA1-213ENST00000560856 UNC119BA6NIH7 251 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 AQP12BA6NM10 295 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 DNAJC8O75937 253 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 KRT36O76013 467 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 NDUFB2O95178 105 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC2A10O95528 541 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 PAX1P15863 534 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 CALCRP30988 508 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 ACVR1BP36896 505 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 GSSP48637 474 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 NAAAQ02083 359 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 CHRNB3Q05901 458 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 FMODQ06828 376 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF770Q6IQ21 691 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 C1orf94Q6P1W5 598 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 AQP12AQ8IXF9 295 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 SLC22A24Q8N4F4 322 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 POP5Q969H6 163 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 Q96M85 177 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 SMURF2Q9HAU4 748 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 MOV10Q9HCE1 1003 aaKnown RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 NRIP3Q9NQ35 241 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 MOKQ9UQ07 419 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 ZNF469Q96JG9 3925 aaPredicted RBP13.27□□□□□ -0.29
SNRPA1-213ENST00000560856 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 ATP6V1G2-DDX39BF2Z307 99 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 TMCC2O75069 709 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 PATE4P0C8F1 98 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 FPR3P25089 353 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 ARR3P36575 388 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 IDH3GP51553 393 aaPredicted RBP13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 HGFACQ04756 655 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
SNRPA1-213ENST00000560856 FAM98BQ52LJ0 330 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms