RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 PITX2Q99697 317 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 IFT27Q9BW83 186 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 MRPL13Q9BYD1 178 aaKnown RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 LINC00470Q9BZP3 86 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 OPN3Q9H1Y3 402 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 RASSF4Q9H2L5 321 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLCO5A1Q9H2Y9 848 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 TOR3AQ9H497 397 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 RIBC2Q9H4K1 309 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 C8orf4Q9NR00 106 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SMPD3Q9NY59 655 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 JKAMPQ9P055 326 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 MALT1Q9UDY8 824 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZNF629Q9UEG4 869 aaPredicted RBP6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 IER3IP1Q9Y5U9 82 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 POLEQ07864 2286 aa6.21□□□□□ -1.42
CTDSPL2-210ENST00000560834 INTS1Q8N201 2190 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 IGKV1D-43A0A0B4J1Z2 117 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 FAM90A27PA6NNH2 459 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CENPBD1B2RD01 187 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 EEF1E1-BLOC1S5C9J1V9 151 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 J3QW42 95 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 M0R129 80 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 DVL2O14641 736 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SURF4O15260 269 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 EEF1E1O43324 174 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZG16O60844 167 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC43A1O75387 559 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 MRPL33O75394 65 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 UPK3AO75631 287 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC2A10O95528 541 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 BCL10O95999 233 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 GHRHP01286 108 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 IGHV3-9P01782 118 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 IGHG1P01857 330 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ACADSP16219 412 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 COX5AP20674 150 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 BMP5P22003 454 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 POU1F1P28069 291 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 OPRM1P35372 400 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ACVR1BP36896 505 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CDKN2AP42771 156 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 PTDSS1P48651 473 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZNF133P52736 654 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SMSP52788 366 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 RAD23AP54725 363 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 AQP4P55087 323 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 FOXG1P55316 489 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 FMODQ06828 376 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 DBPQ10586 325 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CAMK2DQ13557 499 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CRMP1Q14194 572 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 GINS1Q14691 196 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 PTGES3Q15185 160 aaKnown RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 HIST3H3Q16695 136 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZNF362Q5T0B9 420 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC35F1Q5T1Q4 408 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CARD17Q5XLA6 110 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ACSM5Q6NUN0 579 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC27A4Q6P1M0 643 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 MTFR2Q6P444 385 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZNF474Q6S9Z5 364 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 HDDC2Q7Z4H3 204 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 MRGPRGQ86SM5 289 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ADCK1Q86TW2 530 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 C20orf196Q8IYI0 205 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 GALNT4Q8N4A0 578 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ARIH2OSQ8N7S6 290 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC37A3Q8NCC5 494 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ZNF566Q969W8 418 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SNX18Q96RF0 628 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ALG12Q9BV10 488 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 PIGMQ9H3S5 423 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 CMC2Q9NRP2 79 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 PLSCR4Q9NRQ2 329 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC7A10Q9NS82 523 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 VSX1Q9NZR4 365 aaPredicted RBP6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ENOPH1Q9UHY7 261 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 PROCRQ9UNN8 238 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 BAIAP2Q9UQB8 552 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 ORC6Q9Y5N6 252 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 HCFC1P51610 2035 aa6.2□□□□□ -1.42
CTDSPL2-210ENST00000560834 HIVEP3Q5T1R4 2406 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 ESPL1Q14674 2120 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 ADGRG4Q8IZF6 3080 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 SLC22A23A1A5C7 686 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 PRSS37A4D1T9 235 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 WIPF3A6NGB9 483 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 A6NIZ1 184 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 J3QKU1 62 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 ARHGEF9O43307 516 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 IDH3BO43837 385 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 SMNDC1O75940 238 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 CNOT4O95628 575 aaKnown RBP6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 ITGA5P08648 1049 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 CTLA4P16410 223 aa6.19□□□□□ -1.42
CTDSPL2-210ENST00000560834 CDH2P19022 906 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms