RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ATAD3AQ9NVI7 634 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 ADPRHL2Q9NX46 363 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 CMTM6Q9NX76 183 aa8.45□□□□□ -1.06
TPM1-225ENST00000560679 AQP12BA6NM10 295 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 POM121CA8CG34 1229 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 CDC14BO60729 498 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 SCN2BO60939 215 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 NPIPB7O75200 414 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 VAMP5O95183 116 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 G6PDP11413 515 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 ATP6V1B2P21281 511 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 RPS4Y1P22090 263 aaKnown RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 FPR2P25090 351 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 GLRXP35754 106 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 CAPZA2P47755 286 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 GSK3BP49841 420 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 MAP2K6P52564 334 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 EPS8Q12929 822 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 CEACAM16Q2WEN9 425 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 ALKBH6Q3KRA9 238 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 KLF17Q5JT82 389 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 PAGE3Q5JUK9 113 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 PHYHD1Q5SRE7 291 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 PRAMEF8Q5VWM4 474 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 PRAMEF7Q5VXH5 474 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 LCN8Q6JVE9 175 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 LEG1Q6P5S2 330 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 DHFR2Q86XF0 187 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 AQP12AQ8IXF9 295 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 BCL6BQ8N143 479 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 KDM8Q8N371 416 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 NATD1Q8N6N6 113 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 GLB1L3Q8NCI6 653 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 ANKK1Q8NFD2 765 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 IL17RDQ8NFM7 739 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 XAGE5Q8WWM1 108 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 RAB39BQ96DA2 213 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 NR1H4Q96RI1 486 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 PCDHAC1Q9H158 963 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 SLC38A1Q9H2H9 487 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 C7orf69Q9H7B7 122 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 ZMAT3Q9HA38 289 aaKnown RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 ZNF224Q9NZL3 707 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 PDP1Q9P0J1 537 aaPredicted RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 GMPR2Q9P2T1 348 aaKnown RBP8.44□□□□□ -1.06
TPM1-225ENST00000560679 B3GAT1Q9P2W7 334 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 ZNF69Q9UC07 566 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 SEC14L4Q9UDX3 406 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 RCE1Q9Y256 329 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 RASD1Q9Y272 281 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 WIPI2Q9Y4P8 454 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 CACNG2Q9Y698 323 aa8.44□□□□□ -1.06
TPM1-225ENST00000560679 AGAP5A6NIR3 686 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 ZNF99A8MXY4 864 aaPredicted RBP8.43□□□□□ -1.06
TPM1-225ENST00000560679 FTCDNL1E5RQL4 147 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 PNMTP11086 282 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 PRPS1L1P21108 318 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 GATA3P23771 443 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 MAPK1P28482 360 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 GCH1P30793 250 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 CLDN17P56750 224 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 CCL8P80075 99 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 LIPEQ05469 1076 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 MRPL2Q5T653 305 aaKnown RBP8.43□□□□□ -1.06
TPM1-225ENST00000560679 ATAD3BQ5T9A4 648 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 SAXO2Q658L1 398 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 TMEM225Q6GV28 225 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 OR4F3Q6IEY1 312 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 SLC2A7Q6PXP3 512 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 TMEM123Q8N131 208 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 SYT14Q8NB59 555 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 DEFB108BQ8NET1 73 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 WFDC12Q8WWY7 111 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 GTF3AQ92664 365 aaKnown RBP8.43□□□□□ -1.06
TPM1-225ENST00000560679 TSPAN32Q96QS1 320 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 PTDSS2Q9BVG9 487 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 ACTR3BQ9P1U1 418 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 AP4S1Q9Y587 144 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 SNX13Q9Y5W8 968 aa8.43□□□□□ -1.06
TPM1-225ENST00000560679 A0A1W2PPW3 197 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 C17orf100A8MU93 164 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 A8MVM7 634 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 HMGN4O00479 90 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ARPC2O15144 300 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 FZD7O75084 574 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 SLC43A1O75387 559 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 CLPTM1O96005 669 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 CD79AP11912 226 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 UQCRBP14927 111 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 OMGP23515 440 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 CXCR1P25024 350 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 ACAA2P42765 397 aaKnown RBP8.42□□□□□ -1.06
TPM1-225ENST00000560679 HSPA13P48723 471 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 AQP4P55087 323 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 LCN2P80188 198 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 PIGFQ07326 219 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 BAMBIQ13145 260 aa8.42□□□□□ -1.06
TPM1-225ENST00000560679 HNRNPA0Q13151 305 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms