RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C3orf36Q3SXR2 165 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 PODNL1Q6PEZ8 512 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 LRFN4Q6PJG9 635 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 MBOAT2Q6ZWT7 520 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 DTX2Q86UW9 622 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 SLC22A24Q8N4F4 322 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 OR13C2Q8NGS9 318 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 MCHR2Q969V1 340 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 FAM46AQ96IP4 442 aaKnown RBP11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 TNFRSF13CQ96RJ3 184 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 SH3GL3Q99963 347 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 NDEL1Q9GZM8 345 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 TXNIPQ9H3M7 391 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 ANKRD19PQ9H560 264 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 CRNNQ9UBG3 495 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 CD300AQ9UGN4 299 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 GDF2Q9UK05 429 aaPredicted RBP11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 TMEM5Q9Y2B1 443 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
CTDSPL2-209ENST00000560620 A0A1W2PRQ8 180 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 VSTM5A8MXK1 200 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 NDUFS7O75251 213 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 PRSS23O95084 383 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 UBL3O95164 117 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 GADD45GO95257 159 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC2A10O95528 541 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 IGLV1-44P01699 117 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 FABP3P05413 133 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 INHBBP09529 407 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 NR2C1P13056 603 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 FOSL1P15407 271 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 PAX1P15863 534 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CALB2P22676 271 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CALCRP30988 508 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 ACVR1BP36896 505 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 GIPRP48546 466 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC9A3P48764 834 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 NUDT6P53370 316 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 DGCR6Q14129 220 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CLEC12BQ2HXU8 276 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CYP2R1Q6VVX0 501 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 MYPOPQ86VE0 399 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 LRRC18Q8N456 261 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 FAM169BQ8N8A8 192 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 OR4F15Q8NGB8 312 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 OR4K5Q8NGD3 323 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC7A13Q8TCU3 470 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 BCAS4Q8TDM0 211 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 NSMAFQ92636 917 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 HTRA1Q92743 480 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 RBP7Q96R05 134 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 GRIP2Q9C0E4 1043 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 KCNN2Q9H2S1 579 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 BARX1Q9HBU1 254 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CA10Q9NS85 328 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 TMEM38BQ9NVV0 291 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 GRHPRQ9UBQ7 328 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF346Q9UL40 294 aaKnown RBP11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 AURKCQ9UQB9 309 aa11.27□□□□□ -0.61
CTDSPL2-209ENST00000560620 CENPBD1B2RD01 187 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SSX4O60224 188 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 IGHV4-39P01824 125 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 PATE4P0C8F1 98 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SERPINF1P36955 418 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 GUCA1AP43080 201 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SMIM11AP58511 58 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SNRPD2P62316 118 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 GALK2Q01415 458 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 FMODQ06828 376 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 DAG1Q14118 895 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 ETFDHQ16134 617 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 ANKDD1AQ495B1 522 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SPATS1Q496A3 300 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZBED5Q49AG3 693 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 ARMC4Q5T2S8 1044 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 KRT80Q6KB66 452 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 TMEM53Q6P2H8 277 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 RINLQ6ZS11 566 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF627Q7L945 461 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC16A14Q7RTX9 510 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 TSEN54Q7Z6J9 526 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SKA3Q8IX90 412 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 HDAC2Q92769 488 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 C7orf34Q96L11 122 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SEPHS2Q99611 448 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 VRK1Q99986 396 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 MRPL13Q9BYD1 178 aaKnown RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 GSX1Q9H4S2 264 aaPredicted RBP11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 B3GNT2Q9NY97 397 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 FBXL3Q9UKT7 428 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 SPEF1Q9Y4P9 236 aa11.26□□□□□ -0.61
CTDSPL2-209ENST00000560620 VPS13CQ709C8 3753 aa11.25□□□□□ -0.61
CTDSPL2-209ENST00000560620 IGHV2OR16-5A0A0B4J2B6 119 aa11.25□□□□□ -0.61
CTDSPL2-209ENST00000560620 TRBV4-1A0A0J9YWV2 114 aa11.25□□□□□ -0.61
CTDSPL2-209ENST00000560620 A6NIZ1 184 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms