RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 PTHP01270 115 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 OR8G3PP0DMU2 310 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 HLA-DOBP13765 273 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 IDO1P14902 403 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 AHCYP23526 432 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 IL12AP29459 219 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 PCGF2P35227 344 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 CDKN2CP42773 168 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 MTNR1AP48039 350 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 CSNK1A1P48729 337 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF81P51508 661 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 NME5P56597 212 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 HOXC5Q00444 222 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 GLO1Q04760 184 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC9A3R2Q15599 337 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 TBC1D28Q2M2D7 210 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 MS4A18Q3C1V0 323 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 FAM209AQ5JX71 171 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 TMEM53Q6P2H8 277 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 C6orf89Q6UWU4 347 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 SPATC1Q76KD6 591 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF584Q8IVC4 421 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 SKA3Q8IX90 412 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 BCL6BQ8N143 479 aaPredicted RBP15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 OR1J2Q8NGS2 313 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 TMIGD2Q96BF3 282 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 C1orf147Q96MC9 270 aaPredicted RBP15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 EPYCQ99645 322 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 PKP2Q99959 881 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 EGLN1Q9GZT9 426 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 THUMPD1Q9NXG2 353 aaKnown RBP15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 SELENONQ9NZV5 590 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 LEF1Q9UJU2 399 aaPredicted RBP15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 NOTCH1P46531 2555 aa15.12■□□□□ 0.01
TSPAN3-208ENST00000560514 A0A087WUJ7 227 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 A0A0G2JPF8 293 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 A0A1B0GUS0 222 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 PLSCR5A0PG75 271 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 TMEM120BA0PK00 339 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 HNRNPCL2B2RXH8 293 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 HNRNPCL3B7ZW38 293 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 HNRNPCL1O60812 293 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 SERPINI2O75830 405 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 ZCCHC18P0CG32 403 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 HNRNPCL4P0DMR1 293 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 CCL2P13500 99 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 UCP2P55851 309 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 DSTNP60981 165 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF154Q13106 437 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 PMS2P3Q13401 168 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 MAPK11Q15759 364 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 RPS26P11Q5JNZ5 115 aaPredicted RBP15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 MSANTD1Q6ZTZ1 278 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 ANKRD42Q8N9B4 389 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 SCAIQ8N9R8 606 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 DEFB108BQ8NET1 73 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC38A5Q8WUX1 472 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 TXNDC15Q96J42 360 aa15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 MAELQ96JY0 434 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 WDR55Q9H6Y2 383 aaPredicted RBP15.11■□□□□ 0.01
TSPAN3-208ENST00000560514 IQCMA0A1B0GVH7 501 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 M0QZ24 198 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 RFXANKO14593 260 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 SPRY3O43610 288 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC22A3O75751 556 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ANP32DO95626 131 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 HPRP00739 348 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ETFAP13804 333 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 MAKP20794 623 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 OMGP23515 440 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 EPHA3P29320 983 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ERVS71-1P61550 626 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 PLP2Q04941 152 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 PUDPQ08623 228 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 TUSC1Q2TAM9 212 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ALG10BQ5I7T1 473 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC22A24Q8N4F4 322 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 PAQR4Q8N4S7 273 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 C10orf53Q8N6V4 93 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 DNAJA4Q8WW22 397 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 TAF15Q92804 592 aaKnown RBP eCLIP15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC35B4Q969S0 331 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ZNF48Q96MX3 618 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 MMP27Q9H306 513 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 NKIRAS1Q9NYS0 192 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 ZIM2Q9NZV7 527 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 KLHL14Q9P2G3 628 aa15.1■□□□□ 0.01
TSPAN3-208ENST00000560514 IGHMP01871 453 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 CRYBA1P05813 215 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 SLC36A2Q495M3 483 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 KLF17Q5JT82 389 aaPredicted RBP15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 HIST2H2BDQ6DRA6 164 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 C16orf87Q6PH81 154 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 DPPA2Q7Z7J5 298 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 KLHL36Q8N4N3 616 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 OR1J1Q8NGS3 322 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 FGFBP3Q8TAT2 258 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 GTF3AQ92664 365 aaKnown RBP15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 UBE2FQ969M7 185 aa15.09■□□□□ 0.01
TSPAN3-208ENST00000560514 TMEM19Q96HH6 336 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms