RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 PNPLA2Q96AD5 504 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 C3orf49Q96BT1 292 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 ERMAPQ96PL5 475 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 KLHL21Q9UJP4 597 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 RPH3AQ9Y2J0 694 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 ZNF407Q9C0G0 2248 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 HTR3EA5X5Y0 456 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 PRKCAP17252 672 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 IL11P20809 199 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 MTNR1BP49286 362 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 EIF2B2P49770 351 aaKnown RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 SLC16A1P53985 500 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 TAS2R43P59537 309 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 PLGLB1Q02325 96 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 TRAM1Q15629 374 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 RPUSD3Q6P087 351 aaKnown RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 OR52E2Q8NGJ4 325 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 ADAM19Q9H013 955 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 TSPAN10Q9H1Z9 355 aaPredicted RBP14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 TIGARQ9NQ88 270 aa14.22□□□□□ -0.13
CDC42BPB-204ENST00000559043 A0A1W2PQ09 198 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 MCIDASD6RGH6 385 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 MRPL3P09001 348 aaKnown RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 HIST1H1CP16403 213 aaKnown RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 PGCP20142 388 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 AZGP1P25311 298 aaKnown RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 GDF1P27539 372 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 SLC6A8P48029 635 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 RFX2P48378 723 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 DSCR4P56555 118 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 B3GALT5-AS1P59052 145 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 RPS4XP62701 263 aaKnown RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 SCN1BQ07699 218 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 SELENBP1Q13228 472 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 GGTLC2Q14390 218 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 WIPI1Q5MNZ9 446 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 METAP1DQ6UB28 335 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 DPY19L2P2Q6ZN68 376 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 VASH1Q7L8A9 365 aaPredicted RBP14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 NRARPQ7Z6K4 114 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 LRRC17Q8N6Y2 441 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 ZNF563Q8TA94 476 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 DEFB127Q9H1M4 99 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 TAS2R10Q9NYW0 307 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 ZNF337Q9Y3M9 751 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 NOX1Q9Y5S8 564 aa14.21□□□□□ -0.13
CDC42BPB-204ENST00000559043 KALRNO60229 2985 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 E9PI62 339 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ETV2O00321 342 aaPredicted RBP14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TRAPPC6AO75865 159 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 OR7A10O76100 309 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 GYPBP06028 91 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 CSF3P09919 207 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 PTBP1P26599 531 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 FOXF1Q12946 379 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 CBX3Q13185 183 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ASAH1Q13510 395 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TOMM20Q15388 145 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 CELF2-AS1Q8N7Q2 184 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 RELTQ969Z4 430 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 C4orf36Q96KX1 117 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 DDOQ99489 341 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 PPP1R3EQ9H7J1 279 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 PTGES2Q9H7Z7 377 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 COMMD3Q9UBI1 195 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 GRIP1Q9Y3R0 1128 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 IER3IP1Q9Y5U9 82 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 LIPGQ9Y5X9 500 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ZFYVE26Q68DK2 2539 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 IGKV1D-42A0A075B6H8 117 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 DVL2O14641 736 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ARPC3O15145 178 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TMCC2O75069 709 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SC5DO75845 299 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 NCR1O76036 304 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 HPNP05981 417 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TACR3P29371 465 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SRD5A2P31213 254 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 DLX5P56178 289 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 PRR30Q53SZ7 412 aaPredicted RBP14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SLC25A53Q5H9E4 307 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 WBP2NLQ6ICG8 309 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SPATC1Q76KD6 591 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ADGRG3Q86Y34 549 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SIAH3Q8IW03 269 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 CISD2Q8N5K1 135 aaKnown RBP14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 TEX19Q8NA77 164 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 POMGNT2Q8NAT1 580 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SDR9C7Q8NEX9 313 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 OR4K13Q8NH42 304 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 LIPHQ8WWY8 451 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 GPX7Q96SL4 187 aaPredicted RBP14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 ZDHHC11Q9H8X9 412 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 NRIP3Q9NQ35 241 aa14.2□□□□□ -0.14
CDC42BPB-204ENST00000559043 SPTA1P02549 2419 aa14.19□□□□□ -0.14
CDC42BPB-204ENST00000559043 DNAJC13O75165 2243 aa14.19□□□□□ -0.14
CDC42BPB-204ENST00000559043 LRRN3E7EW58 273 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms