RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 DGUOKQ16854 277 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 EXOC3L2Q2M3D2 409 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 Q6ZPB1 254 aaPredicted RBP1.83□□□□□ -2.12
VPS13C-207ENST00000558919 LINC00173Q6ZV60 143 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 STPG2Q8N412 459 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 MFSD9Q8NBP5 474 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 SDR42E1Q8WUS8 393 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 RGP1Q92546 391 aaPredicted RBP1.83□□□□□ -2.12
VPS13C-207ENST00000558919 COQ2Q96H96 371 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 CCT7Q99832 543 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 PARD6BQ9BYG5 372 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 ULBP2Q9BZM5 246 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 SPNS1Q9H2V7 528 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 GORASP2Q9H8Y8 452 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 MSH6P52701 1360 aa1.83□□□□□ -2.12
VPS13C-207ENST00000558919 IGHV5-10-1A0A0J9YXX1 117 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CLRN2A0PK11 232 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 RPL36A-HNRNPH2H7BZ11 118 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 RBFOX2O43251 390 aaKnown RBP eCLIP1.82□□□□□ -2.12
VPS13C-207ENST00000558919 TOM1O60784 492 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 MTX2O75431 263 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 MPZL1O95297 269 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CAPN1P07384 714 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 ADRA2AP08913 450 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 POLR2MP0CAP2 368 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 RNASE2P10153 161 aaKnown RBP1.82□□□□□ -2.12
VPS13C-207ENST00000558919 DBTP11182 482 aaKnown RBP1.82□□□□□ -2.12
VPS13C-207ENST00000558919 PRPS2P11908 318 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 TCN2P20062 427 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 FDFT1P37268 417 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 NAMPTP43490 491 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 ACTR1AP61163 376 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CACNG7P62955 275 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 SCRN3Q0VDG4 424 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 IL24Q13007 206 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 HES5Q5TA89 166 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 OR4F3Q6IEY1 312 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CASC1Q6TDU7 716 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 RGS9BPQ6ZS82 235 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 TRIM69Q86WT6 500 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 VSTM4Q8IW00 320 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CNPY4Q8N129 248 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 OR52P1PQ8NH57 321 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 SGK3Q96BR1 496 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 SLC41A3Q96GZ6 507 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 RBM14Q96PK6 669 aaKnown RBP1.82□□□□□ -2.12
VPS13C-207ENST00000558919 SLC38A2Q96QD8 506 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 SH3GL3Q99963 347 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 FAIM2Q9BWQ8 316 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 ADAP2Q9NPF8 381 aa1.82□□□□□ -2.12
VPS13C-207ENST00000558919 CENPJQ9HC77 1338 aaPredicted RBP1.82□□□□□ -2.12
VPS13C-207ENST00000558919 GPATCH8Q9UKJ3 1502 aaKnown RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 TRAV26-1A0A087WT03 109 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 RRP8O43159 456 aaKnown RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 LINC00869P0C866 280 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 FOLR1P15328 257 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 RDXP35241 583 aaKnown RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 RORAP35398 523 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 UBE2HP62256 183 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 CDK16Q00536 496 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 SYCNQ0VAF6 134 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ERCC8Q13216 396 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 SF3A2Q15428 464 aaKnown RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 KCTD21Q4G0X4 260 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 DNLZQ5SXM8 178 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ZNF684Q5T5D7 378 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 CENPPQ6IPU0 288 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 TRIM40Q6P9F5 258 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 DUX4L9Q6RFH8 374 aaPredicted RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ZNF493Q6ZR52 646 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ABHD13Q7L211 337 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 WDR86Q86TI4 376 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ZCCHC7Q8N3Z6 543 aaKnown RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ZNF557Q8N988 423 aaPredicted RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 TRPV1Q8NER1 839 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ESR2Q92731 530 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 SORT1Q99523 831 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 KCTD14Q9BQ13 255 aaPredicted RBP1.81□□□□□ -2.12
VPS13C-207ENST00000558919 TMEM43Q9BTV4 400 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 VCX2Q9H322 139 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 NIPAL2Q9H841 368 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 LRRC40Q9H9A6 602 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 HMG20AQ9NP66 347 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 ISYNA1Q9NPH2 558 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 PTPRTO14522 1441 aa1.81□□□□□ -2.12
VPS13C-207ENST00000558919 IGLV3-12A0A075B6K2 115 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 IGHV3-74A0A0B4J1X5 117 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 PCP4L1A6NKN8 68 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 CXCL11O14625 94 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 KMOO15229 486 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 SLC25A14O95258 325 aaPredicted RBP1.8□□□□□ -2.12
VPS13C-207ENST00000558919 IGHV2-5P01817 119 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 SLC2A5P22732 501 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 YAP1P46937 504 aaKnown RBP1.8□□□□□ -2.12
VPS13C-207ENST00000558919 CCT3P49368 545 aaKnown RBP1.8□□□□□ -2.12
VPS13C-207ENST00000558919 CEBPDP49716 269 aaPredicted RBP1.8□□□□□ -2.12
VPS13C-207ENST00000558919 UGT2B15P54855 530 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 FGL1Q08830 312 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 PRPSAP1Q14558 356 aa1.8□□□□□ -2.12
VPS13C-207ENST00000558919 ARHGAP19Q14CB8 494 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms