RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 LPAR6P43657 344 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 RAB1AP62820 205 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ATXN7L2Q5T6C5 722 aaPredicted RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 AGBL4Q5VU57 503 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 TCEANCQ8N8B7 351 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 AARSD1Q9BTE6 412 aaKnown RBP10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 IL21RQ9HBE5 538 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 ADAM18Q9Y3Q7 739 aa10.08□□□□□ -0.8
SEMA4B-204ENST00000558065 B4GALT5O43286 388 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 ACAA2P42765 397 aaKnown RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 TAS2R38P59533 333 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 PCGF3Q3KNV8 242 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 BTNL8Q6UX41 500 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 FAM83HQ6ZRV2 1179 aaPredicted RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 TMEM183AQ8IXX5 376 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF100Q8IYN0 542 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 BBS1Q8NFJ9 593 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 OR5L2Q8NGL0 311 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 NDRG1Q92597 394 aaKnown RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 MICU1Q9BPX6 476 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 OR8D2Q9GZM6 311 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 SPATC1LQ9H0A9 340 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 ASB6Q9NWX5 421 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 CKAP5Q14008 2032 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 IGKV6D-41A0A0C4DH26 115 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 DCTN6O00399 190 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 TPT1P13693 172 aaKnown RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 AKT2P31751 481 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 MC5RP33032 325 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 GIPRP48546 466 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 EFNA5P52803 228 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 CLDN12P56749 244 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 MESP2Q0VG99 397 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 OCIAD2Q56VL3 154 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 SHISA2Q6UWI4 295 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 NDUFAF7Q7L592 441 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 TMCO2Q7Z6W1 182 aaPredicted RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 GABRG1Q8N1C3 465 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 CSGALNACT1Q8TDX6 532 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 FGF11Q92914 225 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 SAT2Q96F10 170 aaPredicted RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF350Q9GZX5 532 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 TREX1Q9NSU2 369 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 SMPXQ9UHP9 88 aa10.07□□□□□ -0.8
SEMA4B-204ENST00000558065 SNAI1O95863 264 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ELFN1P0C7U0 828 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 UCP3P55916 312 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CACNG1Q06432 222 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 LASP1Q14847 261 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 HEPACAMQ14CZ8 416 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SYT14P1Q58G82 188 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MORN1Q5T089 497 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 FRRS1Q6ZNA5 592 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 BEST3Q8N1M1 668 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 HORMAD2Q8N7B1 307 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OR8J1Q8NGP2 316 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OR52I2Q8NH67 350 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 KCNE4Q8WWG9 221 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PCYT2Q99447 389 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TBL1XR1Q9BZK7 514 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 FGF20Q9NP95 211 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CYTL1Q9NRR1 136 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 KLK11Q9UBX7 282 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PCTPQ9UKL6 214 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CCL27Q9Y4X3 112 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 RBM7Q9Y580 266 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TICRRQ7Z2Z1 1910 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC22A31A6NKX4 558 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 J3KTA2 159 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 GLRA1P23415 457 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 AGTR2P50052 363 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TPI1P60174 286 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ID2Q02363 134 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MAP2K5Q13163 448 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 YOD1Q5VVQ6 348 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 EIF5AL1Q6IS14 154 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MRNIPQ6NTE8 343 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OVCH1Q7RTY7 1134 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OR4E2Q8NGC2 313 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OR14L1PQ8NHC6 308 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CMBLQ96DG6 245 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SCRT1Q9BWW7 348 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 IL36AQ9UHA7 158 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SEPT4O43236 478 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 GALR2O43603 387 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF7P17097 686 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PPP2CBP62714 309 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PPP2CAP67775 309 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 NAAAQ02083 359 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 AIMP2Q13155 320 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PTPRNQ16849 979 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms