RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CH25HO95992 272 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF250P15622 560 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 RUNX1T1Q06455 604 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 ALKBH6Q3KRA9 238 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 AGKQ53H12 422 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 ENTPD8Q5MY95 495 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 RGS7BPQ6MZT1 257 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-224ENST00000557713 C1orf229Q6ZS94 237 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-224ENST00000557713 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
SCFD1-224ENST00000557713 LRRC17Q8N6Y2 441 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 SLC30A7Q8NEW0 376 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF566Q969W8 418 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 TSPAN32Q96QS1 320 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 SLCO1B3Q9NPD5 702 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 TAAR3PQ9P1P4 343 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-224ENST00000557713 ANGPT4Q9Y264 503 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 TRAV20A0A0B4J274 112 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 CPSF4LA6NMK7 179 aaKnown RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 M0QX08 132 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF500O60304 480 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 ENTPD5O75356 428 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 QDPRP09417 244 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 FAM157BP0CG42 384 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 PGA4P0DJD7 388 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 PGA3P0DJD8 388 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 CCL2P13500 99 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 CRYBB2P43320 205 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 ATP4BP51164 291 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 MYBPC1Q00872 1141 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 MELKQ14680 651 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 HIST3H3Q16695 136 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 NKPD1Q17RQ9 610 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 MMEL1Q495T6 779 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 FAHD2BQ6P2I3 314 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 TTC33Q6PID6 262 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 DPPA2Q7Z7J5 298 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 TSPYL5Q86VY4 417 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 OR4D11Q8NGI4 311 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 SYNPRQ8TBG9 265 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 FAHD2AQ96GK7 314 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 HINT3Q9NQE9 182 aaKnown RBP13.62□□□□□ -0.23
SCFD1-224ENST00000557713 G6PC2Q9NQR9 355 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 NANSQ9NR45 359 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 NKIRAS2Q9NYR9 191 aa13.62□□□□□ -0.23
SCFD1-224ENST00000557713 RNF13O43567 381 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 CDC14BO60729 498 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 FARS2O95363 451 aaKnown RBP13.61□□□□□ -0.23
SCFD1-224ENST00000557713 SNAP29O95721 258 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 AVPP01185 164 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 OPN1SWP03999 348 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ASAH2BP0C7U1 165 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 COMPP49747 757 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-224ENST00000557713 UCP2P55851 309 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 KLF3P57682 345 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-224ENST00000557713 CCL8P80075 99 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 RBBP4Q09028 425 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 SCGB2A2Q13296 93 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 PCGF3Q3KNV8 242 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 NRN1LQ496H8 165 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 TMEM53Q6P2H8 277 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 C11orf65Q8NCR3 313 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 OR4K5Q8NGD3 323 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF519Q8TB69 540 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ADAMTS16Q8TE57 1224 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF418Q8TF45 676 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF426Q9BUY5 554 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 C1orf198Q9H425 327 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 RNF121Q9H920 327 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 CDH20Q9HBT6 801 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 GPR160Q9UJ42 338 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF229Q9UJW7 825 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 SLC7A7Q9UM01 511 aa13.61□□□□□ -0.23
SCFD1-224ENST00000557713 BCL10O95999 233 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 PNPP00491 289 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 PTHP01270 115 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 LCKP06239 509 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 ANPEPP15144 967 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 CD247P20963 164 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 RAD52P43351 418 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SELENOVP59797 346 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 ERVS71-1P61550 626 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SELPLGQ14242 412 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SLC36A2Q495M3 483 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 ACSM5Q6NUN0 579 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 TMEM154Q6P9G4 183 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SHQ1Q6PI26 577 aaKnown RBP13.6□□□□□ -0.23
SCFD1-224ENST00000557713 THSD4Q6ZMP0 1018 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 USP43Q70EL4 1123 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SLC16A14Q7RTX9 510 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 C11orf40Q8WZ69 217 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 MCHR2Q969V1 340 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 MPP4Q96JB8 637 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SEPHS2Q99611 448 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 PRSS27Q9BQR3 290 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 MRPL13Q9BYD1 178 aaKnown RBP13.6□□□□□ -0.23
SCFD1-224ENST00000557713 BCL2L14Q9BZR8 327 aa13.6□□□□□ -0.23
SCFD1-224ENST00000557713 SLC19A3Q9BZV2 496 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms