RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ROR2Q01974 943 aaKnown RBP13.46□□□□□ -0.25
NEDD1-213ENST00000557644 NPRL3Q12980 569 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 SNTB1Q13884 538 aaKnown RBP13.46□□□□□ -0.25
NEDD1-213ENST00000557644 HDDC2Q7Z4H3 204 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 LRR1Q96L50 414 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 GABARAPL3Q9BY60 117 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 ULBP2Q9BZM5 246 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 LINC00470Q9BZP3 86 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 GPR35Q9HC97 309 aa13.46□□□□□ -0.25
NEDD1-213ENST00000557644 PRSS37A4D1T9 235 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 A6NIZ1 184 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 DLGAP1O14490 977 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 QDPRP09417 244 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 RAP1BP61224 184 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 RAP1AP62834 184 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 STAC2Q6ZMT1 411 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 CYB561A3Q8NBI2 242 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 MCHR2Q969V1 340 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
NEDD1-213ENST00000557644 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 SLC22A23A1A5C7 686 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 OR6C65A6NJZ3 312 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 ZNF587BE7ETH6 402 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 IDH3BO43837 385 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 CNOT4O95628 575 aaKnown RBP13.45□□□□□ -0.26
NEDD1-213ENST00000557644 CCKARP32238 428 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.45□□□□□ -0.26
NEDD1-213ENST00000557644 CEACAM16Q2WEN9 425 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 FBXL19-AS1Q494R0 122 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 FBXW10Q5XX13 1052 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 LEG1Q6P5S2 330 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 HTRA1Q92743 480 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 TSSK2Q96PF2 358 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 MBOAT4Q96T53 435 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 FN3KQ9H479 309 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 NPDC1Q9NQX5 325 aaPredicted RBP13.45□□□□□ -0.26
NEDD1-213ENST00000557644 ORC6Q9Y5N6 252 aa13.45□□□□□ -0.26
NEDD1-213ENST00000557644 OR6C68A6NDL8 312 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ZAR1LA6NP61 321 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 C19orf84I3L1E1 186 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 M0R129 80 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 SEC14L2O76054 403 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 COX5AP20674 150 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ETFDHQ16134 617 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 JAZF1Q86VZ6 243 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 NPEPL1Q8NDH3 523 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 NSMAFQ92636 917 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 SLC25A19Q9HC21 320 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 BAIAP2Q9UQB8 552 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 USP9YO00507 2555 aaPredicted RBP13.44□□□□□ -0.26
NEDD1-213ENST00000557644 A1L4Q6 167 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 DCTN6O00399 190 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 MPGP29372 298 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 CD79BP40259 229 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 RAD23AP54725 363 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ITGADQ13349 1161 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 SFRP5Q5T4F7 317 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ADCK1Q86TW2 530 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ZNF433Q8N7K0 673 aaPredicted RBP13.44□□□□□ -0.26
NEDD1-213ENST00000557644 SLC37A3Q8NCC5 494 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 RNASE6Q93091 150 aaKnown RBP13.44□□□□□ -0.26
NEDD1-213ENST00000557644 ALG12Q9BV10 488 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 RERGLQ9H628 205 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 TAS2R16Q9NYV7 291 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 TVP23BQ9NYZ1 205 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 VSX1Q9NZR4 365 aaPredicted RBP13.44□□□□□ -0.26
NEDD1-213ENST00000557644 GPR52Q9Y2T5 361 aa13.44□□□□□ -0.26
NEDD1-213ENST00000557644 RPL36A-HNRNPH2H7BZ11 118 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 RAD51DO75771 328 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 CTLA4P16410 223 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 UGT2B10P36537 528 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 CRMP1Q14194 572 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 P2RY6Q15077 328 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 FOXN4Q96NZ1 517 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 RBP7Q96R05 134 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 DDOQ99489 341 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 GRIP2Q9C0E4 1043 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 NUAK2Q9H093 628 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 B3GAT2Q9NPZ5 323 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 RPRD1BQ9NQG5 326 aaKnown RBP13.43□□□□□ -0.26
NEDD1-213ENST00000557644 CMC2Q9NRP2 79 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 ELOVL5Q9NYP7 299 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 ENOPH1Q9UHY7 261 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 FAM183AA6NL82 134 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 CENPBD1B2RD01 187 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 SURF4O15260 269 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 SLC16A7O60669 478 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 CLDN1O95832 211 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 GRK5P34947 590 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 THEM4Q5T1C6 240 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 C22orf34Q6ZV56 151 aa13.43□□□□□ -0.26
NEDD1-213ENST00000557644 KISS1RQ969F8 398 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-213ENST00000557644 SMPD3Q9NY59 655 aaPredicted RBP13.43□□□□□ -0.26
NEDD1-213ENST00000557644 A0A096LPE4 126 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 A0A1W2PPZ6 126 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 DHHO43323 396 aa13.42□□□□□ -0.26
NEDD1-213ENST00000557644 PSMB1P20618 241 aaKnown RBP13.42□□□□□ -0.26
NEDD1-213ENST00000557644 CDAP32320 146 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms