RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PLPP2O43688 288 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 KHDRBS3O75525 346 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 IGHG1P01857 330 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 HLA-DQA2P01906 255 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TACSTD2P09758 323 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 POU3F2P20265 443 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SDHBP21912 280 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 FGF9P31371 208 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SOX6P35712 828 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TGFBR1P36897 503 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 HCCSP53701 268 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 RAC3P60763 192 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ARG2P78540 354 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ROR2Q01974 943 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 PLGLB1Q02325 96 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 DYNC1I2Q13409 638 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CCDC58Q4VC31 144 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SOWAHCQ53LP3 525 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 WIPI1Q5MNZ9 446 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 THEM4Q5T1C6 240 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 PDSS1Q5T2R2 415 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 LYPD4Q6UWN0 246 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 GPAT4Q86UL3 456 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZFP41Q8N8Y5 198 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 OR6N2Q8NGY6 317 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TBC1D15Q8TC07 691 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TMEM203Q969S6 136 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 SLC25A44Q96H78 314 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 DACH2Q96NX9 599 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF552Q9H707 407 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 TXNL4BQ9NX01 149 aaKnown RBP11.16□□□□□ -0.62
SHMT2-233ENST00000557529 QPCTLQ9NXS2 382 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 LAMP5Q9UJQ1 280 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 COPS3Q9UNS2 423 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 A3GALT2U3KPV4 340 aa11.16□□□□□ -0.62
SHMT2-233ENST00000557529 ZNF726A6NNF4 738 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 HSPB2A8KAH6 182 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 TNFSF11O14788 317 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 GFRA3O60609 400 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SULT1C4O75897 302 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 KRT8P05787 483 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 CD1AP06126 327 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 GAAP10253 952 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 CD97P48960 835 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 GFRA1P56159 465 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 CARD18P57730 90 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 CLRN1P58418 232 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SIRPAP78324 504 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 EGR3Q06889 387 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SRSF6Q13247 344 aaKnown RBP11.15□□□□□ -0.63
SHMT2-233ENST00000557529 HSPB2Q16082 182 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 MOGQ16653 247 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 HYAL4Q2M3T9 481 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 TP53I3Q53FA7 332 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 HBMQ6B0K9 141 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 VASNQ6EMK4 673 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 RPL22L1Q6P5R6 122 aaKnown RBP11.15□□□□□ -0.63
SHMT2-233ENST00000557529 ARL9Q6T311 187 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 FAM220AQ7Z4H9 259 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 RFLNBQ8N5W9 214 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 ZNF454Q8N9F8 522 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SYT14Q8NB59 555 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 NOXO1Q8NFA2 376 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 OR2V1Q8NHB1 315 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 OTOSQ8NHW6 89 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 ASB17Q8WXJ9 295 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 PELI1Q96FA3 418 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 KCTD7Q96MP8 289 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 TMED9Q9BVK6 235 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.63
SHMT2-233ENST00000557529 MRPL13Q9BYD1 178 aaKnown RBP11.15□□□□□ -0.63
SHMT2-233ENST00000557529 HES7Q9BYE0 225 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 TTTY12Q9BZ98 90 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SLIRPQ9GZT3 109 aaKnown RBP11.15□□□□□ -0.63
SHMT2-233ENST00000557529 RNF167Q9H6Y7 350 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 TIGARQ9NQ88 270 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 GNG8Q9UK08 70 aa11.15□□□□□ -0.63
SHMT2-233ENST00000557529 SLC35F4A4IF30 521 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 METTL15A6NJ78 407 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 E9PI62 339 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 NPIPA2E9PIF3 369 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 NPIPA3F8WFD2 350 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 EIF1AYO14602 144 aaKnown RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 OGG1O15527 345 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 RGS9O75916 674 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 IL1AP01583 271 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 HRGP04196 525 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 WT1P19544 449 aaPredicted RBP11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ALOX5APP20292 161 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ENPP1P22413 925 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 PTGS2P35354 604 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 TGM4P49221 684 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 ENTPD1P49961 510 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 MEOX1P50221 254 aa11.14□□□□□ -0.63
SHMT2-233ENST00000557529 CCL11P51671 97 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms