RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 CFPP27918 469 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 EIF1AXP47813 144 aaKnown RBP11.07□□□□□ -0.64
SHMT2-230ENST00000557427 GIPRP48546 466 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 NUDT6P53370 316 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 RPS3AP61247 264 aaKnown RBP11.07□□□□□ -0.64
SHMT2-230ENST00000557427 EFNB1P98172 346 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF117Q03924 483 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 GINS1Q14691 196 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF141Q15928 474 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM44Q2T9K0 475 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 NDUFAF6Q330K2 333 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 VWA1Q6PCB0 445 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF613Q6PF04 617 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 CBLN3Q6UW01 205 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 BTLAQ7Z6A9 289 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 MISPQ8IVT2 679 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 CMIPQ8IY22 773 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF527Q8NB42 609 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ATP6V1C2Q8NEY4 427 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 TEX47Q8TBZ9 253 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 KCNK17Q96T54 332 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 GPA33Q99795 319 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 PRSS27Q9BQR3 290 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 PRRG4Q9BZD6 226 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 PRRG3Q9BZD7 231 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 HHATLQ9HCP6 504 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-230ENST00000557427 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
SHMT2-230ENST00000557427 DYSFO75923 2080 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 PKD1L1Q8TDX9 2849 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 NPIPB9F8W1W9 429 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 M0R129 80 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 SLC22A1O15245 554 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 NDUFS7O75251 213 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 ENTPD6O75354 484 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 BCAS1O75363 584 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 LYPD3O95274 346 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 IGHV4-39P01824 125 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 LCKP06239 509 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 IL11P20809 199 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 PSMB9P28065 219 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 HTR2AP28223 471 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 RPS4XP62701 263 aaKnown RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 SIRPAP78324 504 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 HOXC5Q00444 222 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 ST3GAL4Q11206 333 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 PON3Q15166 354 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 OR1Q1Q15612 314 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 TOMM34Q15785 309 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 ETFDHQ16134 617 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 CTF1Q16619 201 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 PDZK1Q5T2W1 519 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 RNLSQ5VYX0 342 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 SLC27A4Q6P1M0 643 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 P2RY8Q86VZ1 359 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 GTPBP8Q8N3Z3 284 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 TCEANCQ8N8B7 351 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 FNDC9Q8TBE3 224 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 OSTF1Q92882 214 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 ZBTB8AQ96BR9 441 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 FAM46AQ96IP4 442 aaKnown RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 IL4I1Q96RQ9 567 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM204Q9BSN7 226 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 DCUN1D5Q9BTE7 237 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 OPN3Q9H1Y3 402 aaPredicted RBP11.06□□□□□ -0.64
SHMT2-230ENST00000557427 AMBNQ9NP70 447 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 SLC7A7Q9UM01 511 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 PRR14LQ5THK1 2151 aa11.06□□□□□ -0.64
SHMT2-230ENST00000557427 SERINC4A6NH21 518 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 TNFSF11O14788 317 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 EFNA2O43921 213 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 CXCL13O43927 109 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 BCL10O95999 233 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 SOD3P08294 240 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 ADORA3P0DMS8 318 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 PRG2P13727 222 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-230ENST00000557427 TGFBR2P37173 567 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 CDKN1AP38936 164 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 P2RX1P51575 399 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 CCR4P51679 360 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 RAC1P63000 192 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 LSM11P83369 360 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-230ENST00000557427 PLAURQ03405 335 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 FGFBP1Q14512 234 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM249Q2WGJ8 235 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 PLPPR5Q32ZL2 321 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 OR2A2Q6IF42 318 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 ACSM5Q6NUN0 579 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF367Q7RTV3 350 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 GGNQ86UU5 652 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 TMCO5AQ8N6Q1 288 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 LILRB1Q8NHL6 650 aaPredicted RBP11.05□□□□□ -0.64
SHMT2-230ENST00000557427 GPR119Q8TDV5 335 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM255BQ8WV15 326 aa11.05□□□□□ -0.64
SHMT2-230ENST00000557427 HS6ST2Q96MM7 605 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms