RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 GPR89AB7ZAQ6 455 aa2.54□□□□□ -2
VRK1-207ENST00000557352 G3V3Y1 287 aa2.54□□□□□ -2
VRK1-207ENST00000557352 COPEO14579 308 aa2.54□□□□□ -2
VRK1-207ENST00000557352 PRMT5O14744 637 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 POLR3GO15318 223 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 STX7O15400 261 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 PLIN3O60664 434 aa2.54□□□□□ -2
VRK1-207ENST00000557352 EDF1O60869 148 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 SNNO75324 88 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 KLHL2O95198 593 aa2.54□□□□□ -2
VRK1-207ENST00000557352 VAPBO95292 243 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SLC2A10O95528 541 aa2.54□□□□□ -2
VRK1-207ENST00000557352 APODP05090 189 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C2P06681 752 aa2.54□□□□□ -2
VRK1-207ENST00000557352 BPGMP07738 259 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RBP1P09455 135 aa2.54□□□□□ -2
VRK1-207ENST00000557352 HIST1H2AGP0C0S8 130 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 GPR89BP0CG08 455 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SLC35E2BP0CK96 405 aa2.54□□□□□ -2
VRK1-207ENST00000557352 STMN1P16949 149 aa2.54□□□□□ -2
VRK1-207ENST00000557352 UGT1A6P19224 532 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TAC1P20366 129 aa2.54□□□□□ -2
VRK1-207ENST00000557352 PTPN4P29074 926 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RPA3P35244 121 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 SPAM1P38567 509 aa2.54□□□□□ -2
VRK1-207ENST00000557352 OPRD1P41143 372 aa2.54□□□□□ -2
VRK1-207ENST00000557352 DNAJB13P59910 316 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RAB10P61026 200 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ATP6V0D1P61421 351 aa2.54□□□□□ -2
VRK1-207ENST00000557352 HERV-K104P63124 156 aa2.54□□□□□ -2
VRK1-207ENST00000557352 GNGT1P63211 74 aa2.54□□□□□ -2
VRK1-207ENST00000557352 NTHL1P78549 312 aa2.54□□□□□ -2
VRK1-207ENST00000557352 CBX1P83916 185 aa2.54□□□□□ -2
VRK1-207ENST00000557352 XIAPP98170 497 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ACTN3Q08043 901 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 C17orf67Q0P5P2 114 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ELP6Q0PNE2 266 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ASPHQ12797 758 aa2.54□□□□□ -2
VRK1-207ENST00000557352 CBX3Q13185 183 aa2.54□□□□□ -2
VRK1-207ENST00000557352 FAM83EQ2M2I3 478 aa2.54□□□□□ -2
VRK1-207ENST00000557352 PAGE2BQ5JRK9 111 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C9orf64Q5T6V5 341 aa2.54□□□□□ -2
VRK1-207ENST00000557352 HENMT1Q5T8I9 393 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 ZNF470Q6ECI4 717 aa2.54□□□□□ -2
VRK1-207ENST00000557352 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
VRK1-207ENST00000557352 IRGCQ6NXR0 463 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RNF165Q6ZSG1 346 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TPGS1Q6ZTW0 290 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ASRGL1Q7L266 308 aa2.54□□□□□ -2
VRK1-207ENST00000557352 GET4Q7L5D6 327 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 RALGPS2Q86X27 583 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 SLC22A9Q8IVM8 553 aa2.54□□□□□ -2
VRK1-207ENST00000557352 LRRC34Q8IZ02 419 aa2.54□□□□□ -2
VRK1-207ENST00000557352 CENPLQ8N0S6 344 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 LINC00518Q8N0U6 118 aa2.54□□□□□ -2
VRK1-207ENST00000557352 OR4K2Q8NGD2 314 aa2.54□□□□□ -2
VRK1-207ENST00000557352 BLOC1S5Q8TDH9 187 aa2.54□□□□□ -2
VRK1-207ENST00000557352 PDCD6IPQ8WUM4 868 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 ING5Q8WYH8 240 aa2.54□□□□□ -2
VRK1-207ENST00000557352 OR8D1Q8WZ84 308 aa2.54□□□□□ -2
VRK1-207ENST00000557352 HIST1H2ACQ93077 130 aa2.54□□□□□ -2
VRK1-207ENST00000557352 DNAJC1Q96KC8 554 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 C9orf85Q96MD7 179 aa2.54□□□□□ -2
VRK1-207ENST00000557352 BIRC8Q96P09 236 aa2.54□□□□□ -2
VRK1-207ENST00000557352 VPS35Q96QK1 796 aa2.54□□□□□ -2
VRK1-207ENST00000557352 GABRG3Q99928 467 aa2.54□□□□□ -2
VRK1-207ENST00000557352 MRPL57Q9BQC6 102 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 SELENOSQ9BQE4 189 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ZSCAN5AQ9BUG6 496 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C19orf24Q9BVV8 132 aa2.54□□□□□ -2
VRK1-207ENST00000557352 DERL2Q9GZP9 239 aa2.54□□□□□ -2
VRK1-207ENST00000557352 IQCGQ9H095 443 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 FAM107BQ9H098 131 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RSPH9Q9H1X1 276 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 LINC00597Q9H2U6 94 aa2.54□□□□□ -2
VRK1-207ENST00000557352 CENPHQ9H3R5 247 aa2.54□□□□□ -2
VRK1-207ENST00000557352 POMKQ9H5K3 350 aa2.54□□□□□ -2
VRK1-207ENST00000557352 C8orf33Q9H7E9 229 aaPredicted RBP2.54□□□□□ -2
VRK1-207ENST00000557352 SYTL2Q9HCH5 934 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TAS2R13Q9NYV9 303 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SUN2Q9UH99 717 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TBK1Q9UHD2 729 aa2.54□□□□□ -2
VRK1-207ENST00000557352 PLA2G4CQ9UP65 541 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SLC9A8Q9Y2E8 581 aa2.54□□□□□ -2
VRK1-207ENST00000557352 ACOT9Q9Y305 439 aa2.54□□□□□ -2
VRK1-207ENST00000557352 RNF115Q9Y4L5 304 aa2.54□□□□□ -2
VRK1-207ENST00000557352 TTC28Q96AY4 2481 aa2.54□□□□□ -2
VRK1-207ENST00000557352 CACNA1HO95180 2353 aa2.54□□□□□ -2
VRK1-207ENST00000557352 KNTC1P50748 2209 aa2.54□□□□□ -2
VRK1-207ENST00000557352 KMT2EQ8IZD2 1858 aa2.54□□□□□ -2
VRK1-207ENST00000557352 SPTBN5Q9NRC6 3674 aaKnown RBP2.54□□□□□ -2
VRK1-207ENST00000557352 COL6A3P12111 3177 aa2.53□□□□□ -2
VRK1-207ENST00000557352 PCNX2A6NKB5 2137 aa2.53□□□□□ -2
VRK1-207ENST00000557352 MPDZO75970 2070 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SCN3AQ9NY46 2000 aa2.53□□□□□ -2
VRK1-207ENST00000557352 TRBV2A0A0J9YWF9 115 aa2.53□□□□□ -2
VRK1-207ENST00000557352 GLYATL1P3A0A0U1RQE8 302 aa2.53□□□□□ -2
VRK1-207ENST00000557352 C1orf232A0A0U1RR37 186 aa2.53□□□□□ -2
VRK1-207ENST00000557352 SMIM23A6NLE4 172 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms