RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 PMS2P3Q13401 168 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZMYND11Q15326 602 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF718Q3SXZ3 478 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 METTL11BQ5VVY1 283 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CD276Q5ZPR3 534 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF774Q6NX45 483 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 UNQ6126/PRO20091Q6UXV3 157 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CALHM3Q86XJ0 350 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 RNF130Q86XS8 419 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PDIK1LQ8N165 341 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF283Q8N7M2 679 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 TMEM99Q8N816 258 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ICA1LQ8NDH6 482 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PIK3C3Q8NEB9 887 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 OR8B3Q8NGG8 313 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 OR1J2Q8NGS2 313 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ABHD4Q8TB40 342 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 SAMD8Q96LT4 415 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF75AQ96N20 296 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 OR8B2Q96RD0 313 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CITED2Q99967 270 aaPredicted RBP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 TAPBPLQ9BX59 468 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 FAM234AQ9H0X4 552 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 C1orf198Q9H425 327 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 PIGUQ9H490 435 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 ZMAT4Q9H898 229 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CDH20Q9HBT6 801 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 FARSBQ9NSD9 589 aaKnown RBP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 C19orf73Q9NVV2 129 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 CLN8Q9UBY8 286 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 RCE1Q9Y256 329 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 RASD1Q9Y272 281 aa4.73□□□□□ -1.65
ATXN3-245ENST00000556958 LSM4Q9Y4Z0 139 aaKnown RBP4.73□□□□□ -1.65
ATXN3-245ENST00000556958 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 TMED7-TICAM2A0A0A6YYA0 188 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 NPIPB9F8W1W9 429 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 FBP2O00757 339 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 SURF4O15260 269 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 UBL3O95164 117 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 PAHP00439 452 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 OTCP00480 354 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 LHBP01229 141 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 KRT6AP02538 564 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 KRT6BP04259 564 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CHRM4P08173 479 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 KRT16P08779 473 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 UBTFL6P0CB48 400 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF43P17038 809 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 RYKP34925 604 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ELK3P41970 407 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CRATP43155 626 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 KRT6CP48668 564 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 PITPNBP48739 271 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ANXA11P50995 505 aaKnown RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 MMP15P51511 669 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 POLR2HP52434 150 aaKnown RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CDH13P55290 713 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 RPL11P62913 178 aaKnown RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 COX10Q12887 443 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 HSPB3Q12988 150 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CEACAM7Q14002 265 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 KIR3DS1Q14943 382 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 RAB39AQ14964 217 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 OR7A5Q15622 319 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 FAM83EQ2M2I3 478 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ATP6AP1LQ52LC2 224 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 DCST2Q5T1A1 773 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 NHLRC1Q6VVB1 395 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF813Q6ZN06 617 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ZNF551Q7Z340 670 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 IGDCC3Q8IVU1 814 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 PNLDC1Q8NA58 520 aaKnown RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 SLC30A7Q8NEW0 376 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 OR4F6Q8NGB9 312 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CDC26Q8NHZ8 85 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 VANGL1Q8TAA9 524 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ANP32BQ92688 251 aaKnown RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 LHX4Q969G2 390 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ISOC1Q96CN7 298 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CCDC126Q96EE4 140 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 GIMAP5Q96F15 307 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 CLUHP3Q96NS8 147 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 WDFY2Q96P53 400 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 GPR22Q99680 433 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 NPFFR1Q9GZQ6 430 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 PCDHAC1Q9H158 963 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 B3GAT2Q9NPZ5 323 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 ZNRD1Q9P1U0 126 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 FAF1Q9UNN5 650 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-245ENST00000556958 PPP1R3CQ9UQK1 317 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 POFUT2Q9Y2G5 429 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 TMED7Q9Y3B3 224 aa4.72□□□□□ -1.65
ATXN3-245ENST00000556958 LIPT2A6NK58 231 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PHYHO14832 338 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 AKAP8O43823 692 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 BANF1O75531 89 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 SLC22A3O75751 556 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 HOXA5P20719 270 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms