RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SLC2A10O95528 541 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 PRKACGP22612 351 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 FASP25445 335 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 SSTR2P30874 369 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 HOXC12P31275 282 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 SLC6A6P31641 620 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 SH3BGRP55822 239 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 RAP1BP61224 184 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 RAP1AP62834 184 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 KRR1Q13601 381 aaKnown RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 HIST3H3Q16695 136 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 CLEC12AQ5QGZ9 265 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 FAM205BPQ63HN1 556 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 KLHL24Q6TFL4 600 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 DPY19L2P2Q6ZN68 376 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 C17orf78Q8N4C9 275 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 ARIH2OSQ8N7S6 290 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 MAGEE2Q8TD90 523 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 HTRA1Q92743 480 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 BCL2L2Q92843 193 aaPredicted RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 MCHR2Q969V1 340 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 MUCL1Q96DR8 90 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 PIK3IP1Q96FE7 263 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 USB1Q9BQ65 265 aaKnown RBP15.32■□□□□ 0.04
SHMT2-225ENST00000556798 IFT27Q9BW83 186 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 POFUT2Q9Y2G5 429 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 SLC25A15Q9Y619 301 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 ITPR2Q14571 2701 aa15.32■□□□□ 0.04
SHMT2-225ENST00000556798 CADP27708 2225 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 IGKV1D-43A0A0B4J1Z2 117 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ARRDC5A6NEK1 342 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ERICH4A6NGS2 130 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 CENPBD1B2RD01 187 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 DHHO43323 396 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ENTPD5O75356 428 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 CTAG2O75638 210 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 FCGR1AP12314 374 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 B4GALT1P15291 398 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 SDHAP31040 664 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 RPS6KA3P51812 740 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 KRTAP10-9P60411 292 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 FBXW10Q5XX13 1052 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ANKRD16Q6P6B7 361 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 SHQ1Q6PI26 577 aaKnown RBP15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF813Q6ZN06 617 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 RASSF6Q6ZTQ3 369 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 P2RY8Q86VZ1 359 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 OR8D4Q8NGM9 314 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 NSMAFQ92636 917 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 NMD3Q96D46 503 aaKnown RBP15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ERMAPQ96PL5 475 aaPredicted RBP15.31■□□□□ 0.04
SHMT2-225ENST00000556798 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 FOXB1Q99853 325 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 ALG12Q9BV10 488 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 C1QTNF6Q9BXI9 259 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 SEMA6AQ9H2E6 1030 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 TBC1D23Q9NUY8 699 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 APCP25054 2843 aa15.31■□□□□ 0.04
SHMT2-225ENST00000556798 CYSRT1A8MQ03 144 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 H3BNX3 289 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 XKRYO14609 159 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 IMPA2O14732 288 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 HRGP04196 525 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 TP53P04637 393 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-225ENST00000556798 GSTM3P21266 225 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF83P51522 516 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 UBE2NP61088 152 aaKnown RBP15.3■□□□□ 0.04
SHMT2-225ENST00000556798 GPR139Q6DWJ6 353 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 KLHL17Q6TDP4 642 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 PTCHD4Q6ZW05 846 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 OR52L1Q8NGH7 329 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 OR5K1Q8NHB7 308 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 PLPPR2Q96GM1 343 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 RASSF1Q9NS23 344 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 AMDHD2Q9Y303 409 aa15.3■□□□□ 0.04
SHMT2-225ENST00000556798 FAM221AA4D161 298 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF503-AS2A6NEH8 195 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF23P17027 643 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 LOXP28300 417 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-225ENST00000556798 CAPZA2P47755 286 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 ARHGDIAP52565 204 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF133P52736 654 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-225ENST00000556798 BEX5Q5H9J7 111 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 RPL13AP3Q6NVV1 102 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 SLC25A47Q6Q0C1 308 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 ATG16L2Q8NAA4 619 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 BOD1Q96IK1 185 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 BDH2Q9BUT1 245 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 CLEC4MQ9H2X3 399 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-225ENST00000556798 TMEM38BQ9NVV0 291 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 IL20Q9NYY1 176 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 KIF17Q9P2E2 1029 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 TACC2O95359 2948 aa15.29■□□□□ 0.04
SHMT2-225ENST00000556798 AKAP6Q13023 2319 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 RAI1Q7Z5J4 1906 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-225ENST00000556798 A0A1W2PPR1 153 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 SLC22A23A1A5C7 686 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 PRSS37A4D1T9 235 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms