RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 OTULINQ96BN8 352 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 ZNF837Q96EG3 531 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 PLEKHA8Q96JA3 519 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 LRR1Q96L50 414 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 ALG12Q9BV10 488 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 TAS2R16Q9NYV7 291 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 GTF3C1Q12789 2109 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 CLEC18AA5D8T8 446 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 RENP00797 406 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 IFNGP01579 166 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 NR2C1P13056 603 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 MPGP29372 298 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 DBPQ10586 325 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 RIPK1Q13546 671 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 STK11Q15831 433 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 OGFRL1Q5TC84 451 aaPredicted RBP12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 CLEC18BQ6UXF7 455 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 STAC2Q6ZMT1 411 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 CYB561A3Q8NBI2 242 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 CLEC18CQ8NCF0 446 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 FN3KQ9H479 309 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 TOR3AQ9H497 397 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 TVP23BQ9NYZ1 205 aa12.37□□□□□ -0.43
VIPAS39-208ENST00000556412 SLC22A23A1A5C7 686 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 PRSS44E7EML9 344 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 C16orf97H3BN30 126 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 SLC16A7O60669 478 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 SNAP29O95721 258 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 ITGA5P08648 1049 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 GRK5P34947 590 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 CENPAP49450 140 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 CDK5Q00535 292 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 TGFBR3Q03167 851 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 FBXL19-AS1Q494R0 122 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 SFRP5Q5T4F7 317 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 LRFN4Q6PJG9 635 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 BHLHA15Q7RTS1 189 aaPredicted RBP12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 SLC38A2Q96QD8 506 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 VCXQ9H320 206 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 SLC25A19Q9HC21 320 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 RPRD1BQ9NQG5 326 aaKnown RBP12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 GPR52Q9Y2T5 361 aa12.36□□□□□ -0.43
VIPAS39-208ENST00000556412 A0A096LPE4 126 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 IGKV1D-43A0A0B4J1Z2 117 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 M0R129 80 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 DHHO43323 396 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 HMGN1P05114 100 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 ZNF3P17036 446 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 UGT2B10P36537 528 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 ZNF84P51523 738 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 TFF3Q07654 80 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 CRMP1Q14194 572 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 SNAPC1Q16533 368 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 ZNF433Q8N7K0 673 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 SLC37A3Q8NCC5 494 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 FNDC8Q8TC99 324 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 NRG4Q8WWG1 115 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 HTRA1Q92743 480 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 FOXN4Q96NZ1 517 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 TSSK2Q96PF2 358 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 MBOAT4Q96T53 435 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 NUAK2Q9H093 628 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 SRA1Q9HD15 236 aaKnown RBP12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 NPDC1Q9NQX5 325 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 SMPD3Q9NY59 655 aaPredicted RBP12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 KLHL21Q9UJP4 597 aa12.35□□□□□ -0.43
VIPAS39-208ENST00000556412 A0A1W2PPL8 197 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 OR6C68A6NDL8 312 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 ZAR1LA6NP61 321 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 C19orf84I3L1E1 186 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 B4GALT1P15291 398 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 COX5AP20674 150 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 FBXW10Q5XX13 1052 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 PACRGLQ8N7B6 248 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 S100PBPQ96BU1 408 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 PRRG3Q9BZD7 231 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 SEC61A2Q9H9S3 476 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 C8orf4Q9NR00 106 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 CMC2Q9NRP2 79 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 VSX1Q9NZR4 365 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 MYO18BQ8IUG5 2567 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 A0A1W2PR80 420 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 FAM171A2A8MVW0 826 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 ZNF99A8MXY4 864 aaPredicted RBP12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 RPL36A-HNRNPH2H7BZ11 118 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 SURF4O15260 269 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 CTLA4P16410 223 aa12.34□□□□□ -0.43
VIPAS39-208ENST00000556412 PSMB1P20618 241 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms