RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TXNIPQ9H3M7 391 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 MUC13Q9H3R2 512 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 SEC61A2Q9H9S3 476 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 DLL4Q9NR61 685 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 TMEM38BQ9NVV0 291 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 B3GNT2Q9NY97 397 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 ACTR3BQ9P1U1 418 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 ATP23Q9Y6H3 246 aa10.03□□□□□ -0.8
SLIRP-206ENST00000556375 CDC42EP2O14613 210 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 TRMUO75648 421 aaKnown RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 DIRAS1O95057 198 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 UBL3O95164 117 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 CD8AP01732 235 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 HLA-HP01893 362 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 FABP3P05413 133 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 CELA3BP08861 270 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 QDPRP09417 244 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 T-ENOLP0DO92 83 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 CDKN1AP38936 164 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 LIMS1P48059 325 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 FABP6P51161 128 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF133P52736 654 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 SMIM11AP58511 58 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 NPRL3Q12980 569 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 FHL1Q13642 323 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ETFDHQ16134 617 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 GSG1Q2KHT4 349 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 NRN1LQ496H8 165 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MTX3Q5HYI7 312 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 C10orf128Q5T292 105 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MYPOPQ86VE0 399 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MEX3DQ86XN8 651 aaKnown RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MUC15Q8N387 334 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 LRRC75AQ8NAA5 344 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 SYT14Q8NB59 555 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 OR51A7Q8NH64 312 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 BCAS4Q8TDM0 211 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MCHR2Q969V1 340 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 MCUR1Q96AQ8 359 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 FAM46AQ96IP4 442 aaKnown RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF347Q96SE7 839 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ALG12Q9BV10 488 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 NDEL1Q9GZM8 345 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 DENND2DQ9H6A0 471 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 SMURF2Q9HAU4 748 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 NOX3Q9HBY0 568 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 KRCC1Q9NPI7 259 aaPredicted RBP10.02□□□□□ -0.81
SLIRP-206ENST00000556375 CBLN4Q9NTU7 201 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF224Q9NZL3 707 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 ARFGEF3Q5TH69 2177 aa10.02□□□□□ -0.81
SLIRP-206ENST00000556375 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 IGHV2OR16-5A0A0B4J2B6 119 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 TRBV4-1A0A0J9YWV2 114 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 A6NIZ1 184 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 FARS2O95363 451 aaKnown RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 OR8G3PP0DMU2 310 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 CD79AP11912 226 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 FOSL1P15407 271 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF14P17017 642 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ATP6V1B2P21281 511 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 CALCRP30988 508 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 APOBEC3AP31941 199 aaPredicted RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF84P51523 738 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 CTXN1P60606 82 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 RAP1BP61224 184 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 RPL27P61353 136 aaKnown RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 RAP1AP62834 184 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 SPIBQ01892 262 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 CD47Q08722 323 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ZBED5Q49AG3 693 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 TRPM8Q7Z2W7 1104 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 DPPA2Q7Z7J5 298 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 IGFN1Q86VF2 1251 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 SLC22A24Q8N4F4 322 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 NUP37Q8NFH4 326 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 IL17RDQ8NFM7 739 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 OR4F15Q8NGB8 312 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 OR4K5Q8NGD3 323 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 ZNF519Q8TB69 540 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 FNDC8Q8TC99 324 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 HDAC2Q92769 488 aaKnown RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 NMD3Q96D46 503 aaKnown RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 Q96MF0 132 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 TSPAN32Q96QS1 320 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 TNFRSF13CQ96RJ3 184 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 KCNK17Q96T54 332 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 FUZQ9BT04 418 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 CACNG6Q9BXT2 260 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 C1orf21Q9H246 121 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 IL1RAPQ9NPH3 570 aa10.01□□□□□ -0.81
SLIRP-206ENST00000556375 PRPF19Q9UMS4 504 aaKnown RBP10.01□□□□□ -0.81
SLIRP-206ENST00000556375 NSD1Q96L73 2696 aaPredicted RBP10□□□□□ -0.81
SLIRP-206ENST00000556375 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
SLIRP-206ENST00000556375 PDE5AO76074 875 aa10□□□□□ -0.81
SLIRP-206ENST00000556375 GADD45GO95257 159 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms