RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 IGFN1Q86VF2 1251 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 CYP4Z1Q86W10 505 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 LRRC75AQ8NAA5 344 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 OR13C2Q8NGS9 318 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 FGFBP3Q8TAT2 258 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 SLC7A13Q8TCU3 470 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 MCHR2Q969V1 340 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 MS4A3Q96HJ5 214 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 TMEM38BQ9NVV0 291 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 MAGEL2Q9UJ55 1249 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 ADAM21Q9UKJ8 722 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 NSD1Q96L73 2696 aaPredicted RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 HTR3EA5X5Y0 456 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 NPIPB13A6NJU9 1138 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 EFCAB9A8MZ26 197 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 NPIPB4C9JG80 1138 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 GMNNO75496 209 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 SEMG1P04279 462 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 PATE4P0C8F1 98 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 ACADSP16219 412 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 APOBEC3AP31941 199 aaPredicted RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 ACVR1BP36896 505 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 MXRA7P84157 204 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 TOP3AQ13472 1001 aaPredicted RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 KRT72Q14CN4 511 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 CLEC12BQ2HXU8 276 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 GKAP1Q5VSY0 366 aaPredicted RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 C16orf89Q6UX73 402 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 PIWIL3Q7Z3Z3 882 aaKnown RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 SKA3Q8IX90 412 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 RNF113BQ8IZP6 322 aaKnown RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 OR51A7Q8NH64 312 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 HDAC2Q92769 488 aaKnown RBP17.78■□□□□ 0.44
VTI1B-205ENST00000555543 BDH2Q9BUT1 245 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 TXNIPQ9H3M7 391 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 ANKRD19PQ9H560 264 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 CA10Q9NS85 328 aa17.78■□□□□ 0.44
VTI1B-205ENST00000555543 A0A1W2PRQ8 180 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 SMAD7O15105 426 aaKnown RBP17.77■□□□□ 0.44
VTI1B-205ENST00000555543 H1F0P07305 194 aaKnown RBP17.77■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF14P17017 642 aaPredicted RBP17.77■□□□□ 0.44
VTI1B-205ENST00000555543 RHCEP18577 417 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 GIPRP48546 466 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 FMODQ06828 376 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 TNK1Q13470 666 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 DGCR6Q14129 220 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 MST1LQ2TV78 715 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 PODNL1Q6PEZ8 512 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 HDDC2Q7Z4H3 204 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 BIVMQ86UB2 503 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 OAFQ86UD1 273 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 SLC22A24Q8N4F4 322 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 NMD3Q96D46 503 aaKnown RBP17.77■□□□□ 0.44
VTI1B-205ENST00000555543 FBXO17Q96EF6 278 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 TNFRSF13CQ96RJ3 184 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 SH3GL3Q99963 347 aa17.77■□□□□ 0.44
VTI1B-205ENST00000555543 IGKV1D-43A0A0B4J1Z2 117 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 TRBV4-1A0A0J9YWV2 114 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 CENPBD1B2RD01 187 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 SLC2A10O95528 541 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 IGHMP01871 453 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF26P17031 533 aaPredicted RBP17.76■□□□□ 0.43
VTI1B-205ENST00000555543 PTDSS1P48651 473 aaKnown RBP17.76■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF133P52736 654 aaPredicted RBP17.76■□□□□ 0.43
VTI1B-205ENST00000555543 CTXN1P60606 82 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 SEC23BQ15437 767 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 ADIPOQQ15848 244 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 ETFDHQ16134 617 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 SWI5Q1ZZU3 235 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 FGD3Q5JSP0 725 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 VHLLQ6RSH7 139 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 DNM1P46Q6ZS02 220 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 TMPRSS11FQ6ZWK6 438 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 CLDN22Q8N7P3 220 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 CCDC197Q8NCU1 140 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 OR4F15Q8NGB8 312 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 OR4K5Q8NGD3 323 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 NANOS1Q8WY41 292 aaKnown RBP17.76■□□□□ 0.43
VTI1B-205ENST00000555543 PYURFQ96I23 114 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 DHRS1Q96LJ7 313 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 TSPAN32Q96QS1 320 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 KCNK17Q96T54 332 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 NDE1Q9NXR1 346 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 FAM32AQ9Y421 112 aaKnown RBP17.76■□□□□ 0.43
VTI1B-205ENST00000555543 TLN2Q9Y4G6 2542 aa17.76■□□□□ 0.43
VTI1B-205ENST00000555543 ARFGEF3Q5TH69 2177 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 H7C417 338 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 OR8G3PP0DMU2 310 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 SLC9A3P48764 834 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 RPL27P61353 136 aaKnown RBP17.75■□□□□ 0.43
VTI1B-205ENST00000555543 RAB1AP62820 205 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 C10orf128Q5T292 105 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 Q71RC1 249 aaPredicted RBP17.75■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF584Q8IVC4 421 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 NUP37Q8NFH4 326 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 ZNF519Q8TB69 540 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 FAM46AQ96IP4 442 aaKnown RBP17.75■□□□□ 0.43
VTI1B-205ENST00000555543 NSMCE2Q96MF7 247 aa17.75■□□□□ 0.43
VTI1B-205ENST00000555543 FUZQ9BT04 418 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms