RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 HGFACQ04756 655 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 NPRL3Q12980 569 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 DGCR6Q14129 220 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 MST1LQ2TV78 715 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 ALG10Q5BKT4 473 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 NOXO1Q8NFA2 376 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 OR52J3Q8NH60 311 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 MCHR2Q969V1 340 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 FAM46AQ96IP4 442 aaKnown RBP11.87□□□□□ -0.51
SNX6-203ENST00000555416 NSMCE2Q96MF7 247 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 GPA33Q99795 319 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 SH3GL3Q99963 347 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 KATNB1Q9BVA0 655 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
SNX6-203ENST00000555416 ZNF346Q9UL40 294 aaKnown RBP11.87□□□□□ -0.51
SNX6-203ENST00000555416 IGHV2OR16-5A0A0B4J2B6 119 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 MCIDASD6RGH6 385 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 ARHGEF9O43307 516 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 PDE5AO76074 875 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 SLC2A10O95528 541 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 IGHG1P01857 330 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 CD79AP11912 226 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 OMPP47874 163 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 LIMS1P48059 325 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 DAP3P51398 398 aaKnown RBP11.86□□□□□ -0.51
SNX6-203ENST00000555416 CLRN1P58418 232 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 CTXN1P60606 82 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 MS4A2Q01362 244 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 FMODQ06828 376 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 C3orf36Q3SXR2 165 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 FGD3Q5JSP0 725 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 PRSS57Q6UWY2 283 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 CYP2R1Q6VVX0 501 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 TMPRSS11FQ6ZWK6 438 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 OAFQ86UD1 273 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 CYP4Z1Q86W10 505 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 RNF113BQ8IZP6 322 aaKnown RBP11.86□□□□□ -0.51
SNX6-203ENST00000555416 MUC15Q8N387 334 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 TSPAN32Q96QS1 320 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 KCNK17Q96T54 332 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 TXNIPQ9H3M7 391 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 ANKRD19PQ9H560 264 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 ADAM18Q9Y3Q7 739 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 FAM32AQ9Y421 112 aaKnown RBP11.86□□□□□ -0.51
SNX6-203ENST00000555416 UGT2A1Q9Y4X1 527 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 ZANQ9Y493 2812 aa11.86□□□□□ -0.51
SNX6-203ENST00000555416 NPIPB13A6NJU9 1138 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 NPIPB4C9JG80 1138 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 H7C1Q1 480 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 TMCC2O75069 709 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 PTP4A3O75365 173 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 GMNNO75496 209 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 ZNF14P17017 642 aaPredicted RBP11.85□□□□□ -0.51
SNX6-203ENST00000555416 CDAP32320 146 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 ACVR1BP36896 505 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 GIPRP48546 466 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 ZNF133P52736 654 aaPredicted RBP11.85□□□□□ -0.51
SNX6-203ENST00000555416 FXYD6P3P58550 94 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 RPL27P61353 136 aaKnown RBP11.85□□□□□ -0.51
SNX6-203ENST00000555416 ERVK-25P63136 954 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 MSMPQ1L6U9 139 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 GSG1Q2KHT4 349 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 AGAP6Q5VW22 663 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 THSD4Q6ZMP0 1018 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 FBXL14Q8N1E6 418 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 DEPDC4Q8N2C3 294 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 OR4K5Q8NGD3 323 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 ZNF519Q8TB69 540 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 CACNG6Q9BXT2 260 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 GRIP2Q9C0E4 1043 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 CBLN4Q9NTU7 201 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 TAS2R1Q9NYW7 299 aa11.85□□□□□ -0.51
SNX6-203ENST00000555416 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
SNX6-203ENST00000555416 TCRBV5S2A0A599 114 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 SH3PXD2BA1X283 911 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 H7C1C5 153 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 IMPA2O14732 288 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 IGHMP01871 453 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 CRYAAP02489 173 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 CALB2P22676 271 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
SNX6-203ENST00000555416 ARR3P36575 388 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 PTDSS1P48651 473 aaKnown RBP11.84□□□□□ -0.51
SNX6-203ENST00000555416 MNAT1P51948 309 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 LCN6P62502 163 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 RAB1AP62820 205 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 RAB39AQ14964 217 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 ADIPOQQ15848 244 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 SPATS1Q496A3 300 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 ZBED5Q49AG3 693 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 SLC25A47Q6Q0C1 308 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 VHLLQ6RSH7 139 aa11.84□□□□□ -0.51
SNX6-203ENST00000555416 PIWIL3Q7Z3Z3 882 aaKnown RBP11.84□□□□□ -0.51
SNX6-203ENST00000555416 ZNF584Q8IVC4 421 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms