RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CPNE4Q96A23 557 aaPredicted RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 SARAFQ96BY9 339 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 SNRNP40Q96DI7 357 aaKnown RBP9.08□□□□□ -0.96
NEK9-205ENST00000555405 TMEM80Q96HE8 168 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 OR5M11Q96RB7 305 aa9.08□□□□□ -0.96
NEK9-205ENST00000555405 SMIM18P0DKX4 95 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZNF823P16415 610 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 EDNRAP25101 427 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 HOXD11P31277 338 aaPredicted RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 CD79BP40259 229 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 CLK1P49759 484 aaKnown RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 CXCR4P61073 352 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZNF239Q16600 458 aaKnown RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 LINC00303Q3SY05 128 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 GPR107Q5VW38 600 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 FAM122BQ7Z309 247 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 CD163Q86VB7 1156 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SNX33Q8WV41 574 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ULBP2Q9BZM5 246 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZNF696Q9H7X3 374 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ABCA4P78363 2273 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SLC22A23A1A5C7 686 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 PTHP01270 115 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 HTR1AP08908 422 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ADRA2AP08913 450 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 PATE4P0C8F1 98 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ADAM8P78325 824 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SLC35A2P78381 396 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 TMEM44Q2T9K0 475 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 TP53I3Q53FA7 332 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 KLHL22Q53GT1 634 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZNF773Q6PK81 442 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 CREB3L2Q70SY1 520 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 CLVS1Q8IUQ0 354 aaPredicted RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 GPR137CQ8N3F9 429 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ZNF837Q96EG3 531 aaPredicted RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 WDYHV1Q96HA8 205 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ACKR4Q9NPB9 350 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 UPB1Q9UBR1 384 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 A0A096LPE4 126 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 A0A1W2PPZ6 126 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SLC22A31A6NKX4 558 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 LRRTM2O43300 516 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 TRAF3IP2O43734 574 aaPredicted RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 CRYABP02511 175 aaKnown RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 FKBP2P26885 142 aaKnown RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 ETV1P50549 477 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SLC17A1Q14916 467 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 OCLNQ16625 522 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 KCTD21Q4G0X4 260 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 GID4Q8IVV7 300 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 RPRMLQ8N4K4 120 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 ASB10Q8WXI3 467 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 SLC25A44Q96H78 314 aaPredicted RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 MRPS26Q9BYN8 205 aaKnown RBP9.07□□□□□ -0.96
NEK9-205ENST00000555405 B9D1Q9UPM9 204 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 RASD1Q9Y272 281 aa9.07□□□□□ -0.96
NEK9-205ENST00000555405 A0A087WV48 116 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ETV2O00321 342 aaPredicted RBP9.06□□□□□ -0.96
NEK9-205ENST00000555405 ZNF593O00488 134 aaPredicted RBP9.06□□□□□ -0.96
NEK9-205ENST00000555405 UPK3AO75631 287 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ACTL6AO96019 429 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 TFAP2AP05549 437 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 CDK1P06493 297 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ZNF708P17019 499 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 HTR1FP30939 366 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 PSMB10P40306 273 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 FAPQ12884 760 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 TMEM201Q5SNT2 666 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 RFLNBQ8N5W9 214 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 POMGNT2Q8NAT1 580 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ZDHHC11Q9H8X9 412 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 DKK4Q9UBT3 224 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 FAM208BQ5VWN6 2430 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 MYO18BQ8IUG5 2567 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 CPAMD8Q8IZJ3 1885 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 LOC100506127A0A0U1RQW1 187 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 HTR3EA5X5Y0 456 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 H3BSA7 217 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 RAB36O95755 333 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 NTF4P34130 210 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 BLMHQ13867 455 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ARMC4Q5T2S8 1044 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 GPR141Q7Z602 305 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 ACBD7Q8N6N7 88 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 LIPHQ8WWY8 451 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 LAMP5Q9UJQ1 280 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 GNG8Q9UK08 70 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 FLVCR1Q9Y5Y0 555 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 A6NIZ1 184 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 IDH3BO43837 385 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 SBK2P0C263 348 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 TSPAN19P0C672 248 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 RAP1BP61224 184 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 RAP1AP62834 184 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 IGFL3Q6UXB1 125 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 NUFIP2Q7Z417 695 aaKnown RBP9.06□□□□□ -0.96
NEK9-205ENST00000555405 MED12LQ86YW9 2145 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 KLBQ86Z14 1044 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms