RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SORCS2Q96PQ0 1159 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 DOK1Q99704 481 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ANKRD19PQ9H560 264 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 SEC61A2Q9H9S3 476 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 NOX3Q9HBY0 568 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 INIPQ9NRY2 104 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 TMEM38BQ9NVV0 291 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ABCD2Q9UBJ2 740 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 HIF3AQ9Y2N7 669 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 CMAHPQ9Y471 501 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 ARFGEF3Q5TH69 2177 aa10.24□□□□□ -0.77
VRK1-204ENST00000555351 SLC22A23A1A5C7 686 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 MCIDASD6RGH6 385 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 hCG_2039718K7EN88 272 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 CXCR6O00574 342 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 NME4O00746 187 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 SEC14L2O76054 403 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 QDPRP09417 244 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 USF1P22415 310 aaPredicted RBP10.23□□□□□ -0.77
VRK1-204ENST00000555351 PCSK6P29122 969 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 LSP1P33241 339 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 GIPRP48546 466 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 SLC7A2P52569 658 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 CLRN1P58418 232 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 SF3A3Q12874 501 aaKnown RBP eCLIP10.23□□□□□ -0.77
VRK1-204ENST00000555351 SNTB2Q13425 540 aaKnown RBP10.23□□□□□ -0.77
VRK1-204ENST00000555351 TRAM2Q15035 370 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 FXNQ16595 210 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 SLC36A2Q495M3 483 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 ARMC4Q5T2S8 1044 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 FAM205BPQ63HN1 556 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TMEM53Q6P2H8 277 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 SKA3Q8IX90 412 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 NOXO1Q8NFA2 376 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 PFN4Q8NHR9 129 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 BPIFA2Q96DR5 249 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TPD52L3Q96J77 140 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 MYLK2Q9H1R3 596 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TXNIPQ9H3M7 391 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 C20orf141Q9NUB4 165 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TMEM160Q9NX00 188 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TLN2Q9Y4G6 2542 aa10.23□□□□□ -0.77
VRK1-204ENST00000555351 TMEM129A0AVI4 362 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 GSTA4O15217 222 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 SHOX2O60902 331 aaPredicted RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 TRMUO75648 421 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 SNAP29O95721 258 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 IGHMP01871 453 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 GIFP27352 417 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 AQP2P41181 271 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 PTDSS1P48651 473 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 SLC9A3P48764 834 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 GSK3BP49841 420 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 MRPS34P82930 218 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 GALK2Q01415 458 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 PRKCDQ05655 676 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 PIGFQ07326 219 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 MELKQ14680 651 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 IFI44LQ53G44 452 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 ALG10Q5BKT4 473 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 VHLLQ6RSH7 139 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 TREML1Q86YW5 311 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 HIPK1Q86Z02 1210 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 MAPK1IP1LQ8NDC0 245 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 OR1J2Q8NGS2 313 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 ACOT11Q8WXI4 607 aaPredicted RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 MCHR2Q969V1 340 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 MRPL24Q96A35 216 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 NMD3Q96D46 503 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 MS4A3Q96HJ5 214 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 VRK1Q99986 396 aaPredicted RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 PIMREGQ9BSJ6 248 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 ALG12Q9BV10 488 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 FNDC11Q9BVV2 318 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 NSRP1Q9H0G5 558 aaKnown RBP10.22□□□□□ -0.77
VRK1-204ENST00000555351 MS4A5Q9H3V2 200 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 SIAEQ9HAT2 523 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 SLC7A8Q9UHI5 535 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 RPS6KA6Q9UK32 745 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 CSPG4Q6UVK1 2322 aa10.22□□□□□ -0.77
VRK1-204ENST00000555351 A6NIZ1 184 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 A8MV72 311 aaPredicted RBP10.21□□□□□ -0.77
VRK1-204ENST00000555351 SYNGR3O43761 229 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 AHCYL1O43865 530 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 SNX3O60493 162 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 PRSS23O95084 383 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 F13BP05160 661 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 IFI30P13284 250 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 NR4A2P43354 598 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 GZMKP49863 264 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 NUDT2P50583 147 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 RAP1BP61224 184 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 RAP1AP62834 184 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 THEM4Q5T1C6 240 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 KRT80Q6KB66 452 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 TMPRSS11FQ6ZWK6 438 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 MBOAT2Q6ZWT7 520 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 VTCN1Q7Z7D3 282 aa10.21□□□□□ -0.77
VRK1-204ENST00000555351 CYP4Z1Q86W10 505 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms