RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 LCKP06239 509 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 FAM157BP0CG42 384 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 DRD4P21917 467 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 MAGEB1P43366 347 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 PLP2Q04941 152 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 LRIF1Q5T3J3 769 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF613Q6PF04 617 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 SLC35D2Q76EJ3 337 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 TREML1Q86YW5 311 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF584Q8IVC4 421 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 HIPK4Q8NE63 616 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF519Q8TB69 540 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 NANPQ8TBE9 248 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 TMEM54Q969K7 222 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 TMEM38AQ9H6F2 299 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 TMEM38BQ9NVV0 291 aa13.24□□□□□ -0.29
NEDD1-207ENST00000555114 IGLV3-9A0A075B6K5 115 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 LOC105371242A0A075B767 164 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 IGHV1-69-2A0A0G2JMI3 117 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 IQCMA0A1B0GVH7 501 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 LRRN3E7EW58 273 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 POLR3GO15318 223 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 WIPF1O43516 503 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 RNF13O43567 381 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 CHP2O43745 196 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 FMO6PO60774 539 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SNAP29O95721 258 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 HIST1H2ABP04908 130 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF250P15622 560 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 HOXB9P17482 250 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 GATA3P23771 443 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 CRYBB2P43320 205 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 MRPL19P49406 292 aaKnown RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 ARFIP2P53365 341 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SLC18A1P54219 525 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 CCL8P80075 99 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 MVKQ03426 396 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 HFEQ30201 348 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 NRN1LQ496H8 165 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 FAM209AQ5JX71 171 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 DCAF12L2Q5VW00 463 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 TTC33Q6PID6 262 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 NHLRC1Q6VVB1 395 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 HIST3H2AQ7L7L0 130 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SLC16A14Q7RTX9 510 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 MAVSQ7Z434 540 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 C1QL2Q7Z5L3 287 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 COMTD1Q86VU5 262 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 BPIFB2Q8N4F0 458 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 ICA1LQ8NDH6 482 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 RAB1CQ92928 201 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 HIST1H2ACQ93077 130 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SPDL1Q96EA4 605 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SLC25A44Q96H78 314 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 MCHR1Q99705 422 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 PARD6BQ9BYG5 372 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 NANSQ9NR45 359 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 SLC25A37Q9NYZ2 338 aa13.23□□□□□ -0.29
NEDD1-207ENST00000555114 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
NEDD1-207ENST00000555114 DHHO43323 396 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 MGRN1O60291 552 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 CLPTM1O96005 669 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 IGHG1P01857 330 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 AQP1P29972 269 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 APLNRP35414 380 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF84P51523 738 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 UCP2P55851 309 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 CLRN1P58418 232 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 ZP4Q12836 540 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 AVPI1Q5T686 147 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 BLOC1S3Q6QNY0 202 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 UNQ6126/PRO20091Q6UXV3 157 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 HDDC2Q7Z4H3 204 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
NEDD1-207ENST00000555114 CPEB3Q8NE35 698 aaKnown RBP13.22□□□□□ -0.29
NEDD1-207ENST00000555114 SH3GL3Q99963 347 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 KCNN2Q9H2S1 579 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 OR51B6Q9H340 312 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 SAP30LQ9HAJ7 183 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 SLCO1B3Q9NPD5 702 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 TCF7L2Q9NQB0 619 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 GMEB1Q9Y692 573 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 USH1CQ9Y6N9 552 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 DYSFO75923 2080 aa13.22□□□□□ -0.29
NEDD1-207ENST00000555114 PLPP2O43688 288 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 CH25HO95992 272 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 UMPSP11172 480 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 EGR1P18146 543 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 FPR2P25090 351 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 HSF2Q03933 536 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 SLC3A1Q07837 685 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 ZNF74Q16587 644 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 EPGNQ6UW88 154 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 WDR88Q6ZMY6 472 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 USP51Q70EK9 711 aa13.21□□□□□ -0.29
NEDD1-207ENST00000555114 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms