RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SLC6A11P48066 632 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ASCL1P50553 236 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TBPL2Q6SJ96 375 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MOB3BQ86TA1 216 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 OR52H1Q8NGJ2 320 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SFT2D1Q8WV19 159 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 DPH3Q96FX2 82 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF251Q9BRH9 671 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TUBB1Q9H4B7 451 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 WRAP73Q9P2S5 460 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FBXO4Q9UKT5 387 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 POMT1Q9Y6A1 747 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SMCHD1A6NHR9 2005 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LOC102723971A0A1B0GUV8 181 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM221A6NGB7 291 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 DBX1A6NMT0 343 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 OR7C2O60412 319 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C1orf105O95561 183 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 CYB561P49447 251 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SEMA3BQ13214 749 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ACKR1Q16570 336 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SMUG1Q53HV7 270 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 KCTD11Q693B1 232 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PRSS48Q7RTY5 328 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TTC9BQ8N6N2 239 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 GLIS1Q8NBF1 620 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 NPEPL1Q8NDH3 523 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 CDCA3Q99618 268 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MENTQ9BUN1 341 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ENPP4Q9Y6X5 453 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 IGLV3-22A0A075B6J6 115 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FAM157BP0CG42 384 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SELEP16581 610 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 USF1P22415 310 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 GPLD1P80108 840 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 HOXA4Q00056 320 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 RGNQ15493 299 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 GTDC1Q4AE62 458 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ZMAT1Q5H9K5 638 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C6orf15Q6UXA7 325 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LRRTM1Q86UE6 522 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 OR13C9Q8NGT0 318 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ALG12Q9BV10 488 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SLCO5A1Q9H2Y9 848 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 DUSP22Q9NRW4 184 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 KCND1Q9NSA2 647 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 NECAP2Q9NVZ3 263 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FBXL2Q9UKC9 423 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 TMEM212A6NML5 194 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ATP6V1G2-DDX39BF2Z307 99 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 IAPPP10997 89 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MRPL2Q5T653 305 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FAM43BQ6ZT52 329 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 BORCS6Q96GS4 357 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PIGQQ9BRB3 760 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C1orf198Q9H425 327 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SLA2Q9H6Q3 261 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SPACA1Q9HBV2 294 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 NOX4Q9NPH5 578 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 CDHR4A6H8M9 788 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ACOD1A6NK06 481 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PIAS2O75928 621 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SEMG1P04279 462 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MPGP29372 298 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ZNF91Q05481 1191 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 Q6ZTK2 550 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LACC1Q8IV20 430 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FAM71CQ8NEG0 241 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 OR2T6Q8NHC8 308 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C14orf79Q96F83 325 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C1QTNF2Q9BXJ5 285 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PROCRQ9UNN8 238 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 UFC1Q9Y3C8 167 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 LOC102724200A0A096LPH7 203 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 KIR2DS5A0A0G2JLQ3 304 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 A0A0G2JNG1 304 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 XKRY2A2RUG3 117 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 BLACEA4D250 179 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 NPIPB15A6NHN6 443 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 H7BYZ3 331 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 KIR2DS3K7RE56 304 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 AIFM1O95831 613 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 RBP4P02753 201 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 AHRP35869 848 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 BPIFB3P59826 476 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MFAP5Q13361 173 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 KIR2DS5Q14953 304 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 C6orf89Q6UWU4 347 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PGAP1Q75T13 922 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 FCRLAQ7L513 359 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 OR2G3Q8NGZ4 309 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 ROBO4Q8WZ75 1007 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 PECRQ9BY49 303 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 METTL17Q9H7H0 456 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SLC45A1Q9Y2W3 748 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 MTCL1Q9Y4B5 1905 aaKnown RBP6.37□□□□□ -1.39
SYNE2-216ENST00000555002 SLC16A6O15403 523 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 Q6ZRG5 221 aa6.37□□□□□ -1.39
SYNE2-216ENST00000555002 IRF2BP1Q8IU81 584 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms