RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 PIK3IP1Q96FE7 263 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZC3HAV1LQ96H79 300 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM19Q96HH6 336 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ITCHQ96J02 903 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ARL5BQ96KC2 179 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF300Q96RE9 604 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 SLC39A3Q9BRY0 314 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TMEM204Q9BSN7 226 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 MED18Q9BUE0 208 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ELOVL1Q9BW60 279 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 RSPO3Q9BXY4 272 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 POTEKPQ9BYX7 375 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TRIM2Q9C040 744 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 KLHL4Q9C0H6 718 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 OR11A1Q9GZK7 315 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ACTR6Q9GZN1 396 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 OR10A4Q9H209 315 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 IKZF5Q9H5V7 419 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF385DQ9H6B1 395 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 RMND5AQ9H871 391 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 VIPAS39Q9H9C1 493 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TPT1P8Q9HAU6 139 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 SLC52A3Q9NQ40 469 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TIGARQ9NQ88 270 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 TCF7L2Q9NQB0 619 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 CTPS2Q9NRF8 586 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF226Q9NYT6 803 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 SLC25A37Q9NYZ2 338 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 MSRB1Q9NZV6 116 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 P2RX2Q9UBL9 471 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 CHRNA9Q9UGM1 479 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 NDRG3Q9UGV2 375 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 OSGIN1Q9UJX0 560 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF443Q9Y2A4 671 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 GPR52Q9Y2T5 361 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 HDGFL3Q9Y3E1 203 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 SPIN1Q9Y657 262 aaPredicted RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 FLNAP21333 2647 aaKnown RBP3.65□□□□□ -1.83
VTI1B-203ENST00000554636 ALPK2Q86TB3 2170 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 NAV3Q8IVL0 2385 aa3.65□□□□□ -1.83
VTI1B-203ENST00000554636 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 UQCRHLA0A096LP55 91 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 TMED7-TICAM2A0A0A6YYA0 188 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CFAP73A6NFT4 308 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 NR5A2O00482 541 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CASKO14936 926 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 POLR3GO15318 223 aaPredicted RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF208O43345 1280 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 DNPH1O43598 174 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 NDUFB8O95169 186 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 ANP32DO95626 131 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PMS2P2O95744 297 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 DBIP07108 87 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 YES1P07947 543 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 GKN3PP0CG01 181 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 EGR1P18146 543 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 TNFRSF1BP20333 461 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 COX5AP20674 150 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 IGHV1-2P23083 117 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 IL32P24001 234 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 RYKP34925 604 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 APOBEC1P41238 236 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CRATP43155 626 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 HTR3AP46098 478 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 OR3A2P47893 321 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 IDH2P48735 452 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 POLR2HP52434 150 aaKnown RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CRISP3P54108 245 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 AQP5P55064 265 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 STX1BP61266 288 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CSNK2A1P68400 391 aaPredicted RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 RASGEF1BQ0VAM2 473 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 SQLEQ14534 574 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PDK3Q15120 406 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 RGNQ15493 299 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 TAB1Q15750 504 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 ACKR1Q16570 336 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PAGE3Q5JUK9 113 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 FAM209BQ5JX69 171 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 C6orf10Q5SRN2 563 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 GCNT6Q5T4J0 391 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PRAMEF8Q5VWM4 474 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PRAMEF7Q5VXH5 474 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 ACSM6Q6P461 480 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 C6orf89Q6UWU4 347 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 ZNF704Q6ZNC4 412 aaPredicted RBP3.64□□□□□ -1.83
VTI1B-203ENST00000554636 SERPINA11Q86U17 422 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 COMTD1Q86VU5 262 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PEX5LQ8IYB4 626 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 CLIP4Q8N3C7 705 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 WFDC11Q8NEX6 87 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 STEAP2Q8NFT2 490 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 OR52P1PQ8NH57 321 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 BBS10Q8TAM1 723 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PIGXQ8TBF5 258 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 SLC38A5Q8WUX1 472 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 PMM1Q92871 262 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 MAL2Q969L2 176 aa3.64□□□□□ -1.83
VTI1B-203ENST00000554636 EME1Q96AY2 570 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms