RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 FKRPQ9H9S5 495 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 CTPS2Q9NRF8 586 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 PLCXD1Q9NUJ7 323 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 CHRNA9Q9UGM1 479 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 ENPP5Q9UJA9 477 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 ERGIC3Q9Y282 383 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 GMPPBQ9Y5P6 360 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 SLC25A15Q9Y619 301 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 PMF1-BGLAPU3KQ54 211 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 V9GYQ6 96 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 CADP27708 2225 aa7.76□□□□□ -1.17
TDP1-208ENST00000553989 STAB1Q9NY15 2570 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 CENPVL1A0A0U1RR11 272 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 RGS10O43665 173 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 FCMRO60667 390 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 UGT2B17O75795 530 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 PMS2P2O95744 297 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 ZNF682O95780 498 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 OCM2P0CE71 109 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 OCMP0CE72 109 aaPredicted RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 ANXA8P13928 327 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 ZNF182P17025 639 aaPredicted RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 SRD5A1P18405 259 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 PCMT1P22061 227 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 USF1P22415 310 aaPredicted RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 APOBEC1P41238 236 aaKnown RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 EMX1Q04741 257 aaPredicted RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 GGTLC2Q14390 218 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 ZNF141Q15928 474 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 RGS21Q2M5E4 152 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 C11orf71Q6IPW1 123 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 ZNF544Q6NX49 715 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 B3GLCTQ6Y288 498 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 DCDC5Q6ZRR9 648 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 PRSS48Q7RTY5 328 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 GRINAQ7Z429 371 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 C6orf120Q7Z4R8 191 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 HMGN2P46Q86SG4 172 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 CCDC103Q8IW40 242 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 CLECL1Q8IZS7 167 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 KCNS3Q9BQ31 491 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 OR51I1Q9H343 314 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 ACER3Q9NUN7 267 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 TMEFF2Q9UIK5 374 aaPredicted RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 NDRG4Q9ULP0 352 aaKnown RBP7.75□□□□□ -1.17
TDP1-208ENST00000553989 KCNS2Q9ULS6 477 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 SLC35A3Q9Y2D2 325 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 SH3GLB1Q9Y371 365 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 WDR45Q9Y484 360 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 FKBP7Q9Y680 259 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 A3GALT2U3KPV4 340 aa7.75□□□□□ -1.17
TDP1-208ENST00000553989 IGKV3D-15A0A087WSY6 115 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 A0A096LNT2 108 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ELOA3DA6NLF2 546 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 CLDN24A6NM45 220 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ZNF716A6NP11 495 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 H7C417 338 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ETV2O00321 342 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 RNASET2O00584 256 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 KIAA0513O60268 411 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 MPZL2O60487 215 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 LMX1BO60663 402 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SCN2BO60939 215 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SULT1C4O75897 302 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 KRT33AO76009 404 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 LY6HO94772 140 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 CPSF4O95639 269 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 KRT75O95678 551 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 AGR2O95994 175 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SEMG1P04279 462 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 GSNP06396 782 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 OR12D1P0DN82 309 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 IGHV4-31P0DP07 118 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 IMPDH2P12268 514 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 HNF1AP20823 631 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PRKACGP22612 351 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 CHI3L1P36222 383 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 YAP1P46937 504 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 GZMKP49863 264 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PDLIM4P50479 330 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 DAPP51397 102 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 EFNA4P52798 201 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 SNRPD2P62316 118 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 SELENOWP63302 87 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 TGFBR3Q03167 851 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 POU4F2Q12837 409 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 NPRL3Q12980 569 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 KRR1Q13601 381 aaKnown RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 ARHGAP11BQ3KRB8 267 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ELOA3BQ3SY89 546 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 IQCCQ4KMZ1 466 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 GPAT3Q53EU6 434 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 OR4F3Q6IEY1 312 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 FAM166AQ6J272 317 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 FAHD1Q6P587 224 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 TNFAIP8L2Q6P589 184 aaPredicted RBP7.74□□□□□ -1.17
TDP1-208ENST00000553989 IL17RELQ6ZVW7 336 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 CYP4Z1Q86W10 505 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 PARP8Q8N3A8 854 aa7.74□□□□□ -1.17
TDP1-208ENST00000553989 ATG16L2Q8NAA4 619 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms