RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 SLC22A23A1A5C7 686 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ZAR1LA6NP61 321 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 RPL36A-HNRNPH2H7BZ11 118 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SLC2A10O95528 541 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SNAP29O95721 258 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 IFNGP01579 166 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 HMGN1P05114 100 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ITGA5P08648 1049 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 QDPRP09417 244 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 NR2C1P13056 603 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 COX5AP20674 150 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 IGHV1-2P23083 117 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 MPGP29372 298 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 CD79BP40259 229 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 FOXG1P55316 489 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 FMODQ06828 376 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 TFF3Q07654 80 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 FAM27E3Q08E93 113 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ITGADQ13349 1161 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ZIK1Q3SY52 487 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF362Q5T0B9 420 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 THEM4Q5T1C6 240 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ABHD12BQ7Z5M8 362 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 CXorf67Q86X51 503 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SDR9C7Q8NEX9 313 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 FNDC8Q8TC99 324 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 RNASE6Q93091 150 aaKnown RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 ZNF837Q96EG3 531 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 LRRC46Q96FV0 321 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 RDH12Q96NR8 316 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 RBP7Q96R05 134 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SNX18Q96RF0 628 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 MBOAT4Q96T53 435 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SYT4Q9H2B2 425 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 TOR3AQ9H497 397 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 GPR35Q9HC97 309 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 SMPD3Q9NY59 655 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 TAS2R16Q9NYV7 291 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 VSX1Q9NZR4 365 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-209ENST00000553949 KLHL21Q9UJP4 597 aa10.78□□□□□ -0.68
SHMT2-209ENST00000553949 OR6C68A6NDL8 312 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 RIIAD1A6NNX1 92 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 DLGAP1O14490 977 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 SURF4O15260 269 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 LYZL6O75951 148 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 RENP00797 406 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF3P17036 446 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 PCYT1AP49585 367 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF133P52736 654 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-209ENST00000553949 CEACAM16Q2WEN9 425 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 C10orf128Q5T292 105 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 SFRP5Q5T4F7 317 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 C9orf135Q5VTT2 229 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 SLX4IPQ5VYV7 408 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 STAC2Q6ZMT1 411 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 SLC37A3Q8NCC5 494 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 NPEPL1Q8NDH3 523 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 NSMAFQ92636 917 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 KISS1RQ969F8 398 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-209ENST00000553949 SLC38A2Q96QD8 506 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 DDOQ99489 341 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 HDHD5Q9BXW7 423 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 GRIP2Q9C0E4 1043 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 VCXQ9H320 206 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 CMC2Q9NRP2 79 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 TVP23BQ9NYZ1 205 aa10.77□□□□□ -0.69
SHMT2-209ENST00000553949 INTS1Q8N201 2190 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 DIDO1Q9BTC0 2240 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 FLNCQ14315 2725 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 IGKV1D-43A0A0B4J1Z2 117 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 E9PQ18 207 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 C16orf97H3BN30 126 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 DHHO43323 396 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 CTLA4P16410 223 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 PSMB1P20618 241 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 UGT2B10P36537 528 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 PTDSS1P48651 473 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 SH3BGRP55822 239 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 TGFBR3Q03167 851 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 CRMP1Q14194 572 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 TSC22D1Q15714 1073 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 STK11Q15831 433 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 SNAPC1Q16533 368 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 FBXW10Q5XX13 1052 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 C12orf73Q69YU5 71 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 SLC25A47Q6Q0C1 308 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 BHLHA15Q7RTS1 189 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 ZNF433Q8N7K0 673 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 CYB561A3Q8NBI2 242 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 PRRG3Q9BZD7 231 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 NUAK2Q9H093 628 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 VCX3BQ9H321 246 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 FN3KQ9H479 309 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 RPRD1BQ9NQG5 326 aaKnown RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 NPDC1Q9NQX5 325 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 GPR52Q9Y2T5 361 aa10.76□□□□□ -0.69
SHMT2-209ENST00000553949 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
SHMT2-209ENST00000553949 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms