RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 NDUFB5O43674 189 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 IDH3BO43837 385 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 ICOSLGO75144 302 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 OR7A10O76100 309 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 HSMCR30P0CW71 290 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 PRR23D2P0DMB1 279 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-209ENST00000553659 PEPDP12955 493 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 CD53P19397 219 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 PTGDSP41222 190 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 SLC1A3P43003 542 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 WNT4P56705 351 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 POU4F2Q12837 409 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 FOXF2Q12947 444 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 SNTA1Q13424 505 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 CBFBQ13951 182 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 ADGRE4PQ86SQ3 457 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 ATG4DQ86TL0 474 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-209ENST00000553659 ADCK1Q86TW2 530 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 MEX3DQ86XN8 651 aaKnown RBP14.28□□□□□ -0.12
ACTN1-209ENST00000553659 OR13C2Q8NGS9 318 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 S100ZQ8WXG8 99 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 HGDQ93099 445 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 UCN2Q96RP3 112 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 SMR3AQ99954 134 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 SFXN3Q9BWM7 321 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 ABCA2Q9BZC7 2435 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 PALMDQ9NP74 551 aa14.28□□□□□ -0.12
ACTN1-209ENST00000553659 C2orf72A6NCS6 295 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 ADAM11O75078 769 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 CBR3O75828 277 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 NTN1O95631 604 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 INHBBP09529 407 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 PSMA1P25786 263 aaKnown RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 RNF144AP50876 292 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 NKX6-1P78426 367 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 CD226Q15762 336 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 TSTQ16762 297 aaKnown RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 SHEQ5VZ18 495 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 DESI1Q6ICB0 168 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 NIPAL3Q6P499 406 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 C5orf46Q6UWT4 87 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 DPY19L2P2Q6ZN68 376 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 Q71RC1 249 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 MEPCEQ7L2J0 689 aaKnown RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 KRTAP1-3Q8IUG1 177 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 OR5W2Q8NH69 310 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF563Q8TA94 476 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 DYNC2LI1Q8TCX1 351 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 SMPDL3BQ92485 455 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 WNT2BQ93097 391 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 BORCS5Q969J3 196 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 TMCO6Q96DC7 493 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 OPALINQ96PE5 141 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 GPX7Q96SL4 187 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 TAPBPLQ9BX59 468 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 OR2B2Q9GZK3 357 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 GALNT8Q9NY28 637 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 CCDC59Q9P031 241 aaKnown RBP14.27□□□□□ -0.13
ACTN1-209ENST00000553659 CARD8Q9Y2G2 431 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 GPR52Q9Y2T5 361 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 HEATR5AQ86XA9 2040 aa14.27□□□□□ -0.13
ACTN1-209ENST00000553659 A0A1W2PPR1 153 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 CASKO14936 926 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ARPC3O15145 178 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 CH25HO95992 272 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 IGHA1P01876 353 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 APEHP13798 732 aaKnown RBP14.26□□□□□ -0.13
ACTN1-209ENST00000553659 FUT1P19526 365 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 GADD45AP24522 165 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 NOS3P29474 1203 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ATP6V1E1P36543 226 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 HTR3AP46098 478 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 P2RX1P51575 399 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 CCR4P51679 360 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 GAS1P54826 345 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 FXYD6P3P58550 94 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 VBP1P61758 197 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 SRYQ05066 204 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 LGALS3BPQ08380 585 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ACSM1Q08AH1 577 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 POU4F3Q15319 338 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ZNF829Q3KNS6 432 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-209ENST00000553659 LCN1P1Q5VSP4 162 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 EEF1A1P5Q5VTE0 462 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 LUZP2Q86TE4 346 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 CPOQ8IVL8 374 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 KLHL36Q8N4N3 616 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 WDSUB1Q8N9V3 476 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 OR52N1Q8NH53 320 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 OR14L1PQ8NHC6 308 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 INTS12Q96CB8 462 aaKnown RBP14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ARSGQ96EG1 525 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 OR5M11Q96RB7 305 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 COQ7Q99807 217 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 WDR12Q9GZL7 423 aaKnown RBP14.26□□□□□ -0.13
ACTN1-209ENST00000553659 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 DCSTAMPQ9H295 470 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 PIGMQ9H3S5 423 aa14.26□□□□□ -0.13
ACTN1-209ENST00000553659 GALNT9Q9HCQ5 603 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms