RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 HOXC4P09017 264 aaPredicted RBP15.92■□□□□ 0.14
SYNE3-202ENST00000553340 FCARP24071 287 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 CFPP27918 469 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 SEC13P55735 322 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ACTBP60709 375 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ACTG1P63261 375 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 NFATC4Q14934 902 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ATRAIDQ6UW56 229 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ZNF546Q86UE3 836 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 LRRC75AQ8NAA5 344 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 OR10K1Q8NGX5 313 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ST8SIA2Q92186 375 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 THRSPQ92748 146 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 WDR92Q96MX6 357 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 DNTTIP1Q9H147 329 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 SLC6A15Q9H2J7 730 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 C1orf198Q9H425 327 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 GRHPRQ9UBQ7 328 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 YBX2Q9Y2T7 364 aaKnown RBP15.92■□□□□ 0.14
SYNE3-202ENST00000553340 TMEM14AQ9Y6G1 99 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 FOXS1O43638 330 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ITGB2P05107 769 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 F13BP05160 661 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 PNMTP11086 282 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ALOX5APP20292 161 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 RAB11BQ15907 218 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 C2orf76Q3KRA6 126 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 DPY19L4Q7Z388 723 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ZNF440Q8IYI8 595 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 PRSS35Q8N3Z0 413 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 C12orf45Q8N5I9 185 aaPredicted RBP15.92■□□□□ 0.14
SYNE3-202ENST00000553340 TSEN15Q8WW01 171 aaKnown RBP15.92■□□□□ 0.14
SYNE3-202ENST00000553340 FAM3DQ96BQ1 224 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 MOGAT1Q96PD6 335 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 CCNL2Q96S94 520 aaPredicted RBP15.92■□□□□ 0.14
SYNE3-202ENST00000553340 POTEKPQ9BYX7 375 aa15.92■□□□□ 0.14
SYNE3-202ENST00000553340 ATG2BQ96BY7 2078 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 C5orf42Q9H799 3197 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 A0A0D9SG52 128 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 LOC100289279A0A1B0GTE1 492 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 WNT11O96014 354 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 MELTFP08582 738 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 ITGA5P08648 1049 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 OR4E1P0C645 316 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 WBP2NLQ6ICG8 309 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 C17orf107Q6ZR85 190 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 OR9A4Q8NGU2 314 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 LIPHQ8WWY8 451 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 DCBLD2Q96PD2 775 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 ZNF416Q9BWM5 594 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 CRISPLD2Q9H0B8 497 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 SLC17A5Q9NRA2 495 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 COL4A2P08572 1712 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 TRAV14DV4A0A0A6YYC5 116 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 H0Y8X5 98 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 H7C1C5 153 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 AKR7A3O95154 331 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 TXNDC12O95881 172 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 TAS2R19P59542 299 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 LCN6P62502 163 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 FGL1Q08830 312 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 ZNF169Q14929 603 aaPredicted RBP15.91■□□□□ 0.14
SYNE3-202ENST00000553340 BIVMQ86UB2 503 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 MCATQ8IVS2 390 aaKnown RBP15.91■□□□□ 0.14
SYNE3-202ENST00000553340 YAF2Q8IY57 180 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 GABRG1Q8N1C3 465 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 BEST3Q8N1M1 668 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 BCORP1Q8N888 145 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 STK35Q8TDR2 534 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 GPX8Q8TED1 209 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 FAM131CQ96AQ9 280 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 PBX4Q9BYU1 374 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 ATG5Q9H1Y0 275 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 MMP25Q9NPA2 562 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 PCDHB16Q9NRJ7 776 aa15.91■□□□□ 0.14
SYNE3-202ENST00000553340 A0A0J9YY10 115 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 TMEM82A0PJX8 343 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 HSPB2A8KAH6 182 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 CT45A8P0DMV1 189 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 CT45A9P0DMV2 189 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 RPS27P42677 84 aaKnown RBP15.9■□□□□ 0.14
SYNE3-202ENST00000553340 KCNAB1Q14722 419 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 HSPB2Q16082 182 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 CT45A2Q5DJT8 189 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 EMC4Q5J8M3 183 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 CLVS2Q5SYC1 327 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 ARHGAP40Q5TG30 622 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 OR10Z1Q8NGY1 313 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 C4orf45Q96LM5 186 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 SLC25A21Q9BQT8 299 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-202ENST00000553340 RASL12Q9NYN1 266 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 DNASE2O00115 360 aaPredicted RBP15.9■□□□□ 0.14
SYNE3-202ENST00000553340 SLC17A2O00624 439 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 RENP00797 406 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 FBXO45P0C2W1 286 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 MST1P26927 711 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 CCKBRP32239 447 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 STARP49675 285 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 LY6G6FQ5SQ64 297 aa15.9■□□□□ 0.14
SYNE3-202ENST00000553340 ATG4DQ86TL0 474 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms