RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 UPK3AO75631 287 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CTAG2O75638 210 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ANXA2P07355 339 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR4E1P0C645 316 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR2T7P0C7T2 308 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF888P0CJ79 500 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MGMTP16455 207 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GJA4P35212 333 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RFC3P40938 356 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PTGFRP43088 359 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CAPZA1P52907 286 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 DCDP81605 110 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SCRN3Q0VDG4 424 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 C1orf61Q13536 156 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RUNX3Q13761 415 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ARHGAP11BQ3KRB8 267 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF684Q5T5D7 378 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PRAMEF8Q5VWM4 474 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PRAMEF7Q5VXH5 474 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LIPNQ5VXI9 398 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 METRNLQ641Q3 311 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 H3F3CQ6NXT2 135 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RHOUQ7L0Q8 258 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 BEST3Q8N1M1 668 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GATSQ8NAP1 163 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 STEAP2Q8NFT2 490 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR2L5Q8NG80 312 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR4K14Q8NGD5 310 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR2T27Q8NH04 317 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PAQR8Q8TEZ7 354 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PPP1R1CQ8WVI7 109 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ROBO4Q8WZ75 1007 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MRGPRFQ96AM1 343 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF524Q96C55 264 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MYADMQ96S97 322 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 AMELYQ99218 206 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 AKAP7Q9P0M2 348 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MRM2Q9UI43 246 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TINAGQ9UJW2 476 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 EDARQ9UNE0 448 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GPR34Q9UPC5 381 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 FRYQ5TBA9 3013 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GGT3PA6NGU5 568 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TVP23AA6NH52 213 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 C9JQL5 133 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SOX1O00570 391 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 NUDT14O95848 222 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CT62P0C5K7 136 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 NID1P14543 1247 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SPI1P17947 270 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 AVPR2P30518 371 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CSF2RBP32927 897 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CDKN2AP42771 156 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ARFIP1P53367 373 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RBM39Q14498 530 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CEBPEQ15744 281 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 DCST2Q5T1A1 773 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LINC01590Q5TEZ4 76 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 FCRL6Q6DN72 434 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR10K2Q6IF99 312 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LRRC69Q6ZNQ3 347 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 DGAT2L6Q6ZPD8 337 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RAB11FIP2Q7L804 512 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SLC29A4Q7RTT9 530 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RANBP3LQ86VV4 465 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM200AQ86VY9 491 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LURAP1LQ8IV03 231 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SYS1Q8N2H4 156 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CLEC1AQ8NC01 280 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CCL4L1Q8NHW4 92 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 DCBLD2Q96PD2 775 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LMF1Q96S06 567 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 KLHDC3Q9BQ90 382 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MFRPQ9BY79 579 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SLC17A9Q9BYT1 436 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF350Q9GZX5 532 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 KRCC1Q9NPI7 259 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TNFSF18Q9UNG2 199 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MRPS2Q9Y399 296 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 COLEC10Q9Y6Z7 277 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 VPS13AQ96RL7 3174 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TDRD6O60522 2096 aaKnown RBP4.4□□□□□ -1.7
LIMA1-214ENST00000552783 POM121BA6NF01 834 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 SULT2B1O00204 365 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 P2RX6O15547 441 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 XRCC3O43542 346 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 ITGB2P05107 769 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 CTSEP14091 401 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 HOXB2P14652 356 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF28P17035 718 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 HSD17B2P37059 387 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 ID4P47928 161 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 DIO1P49895 249 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 TRA2BP62995 288 aaKnown RBP4.4□□□□□ -1.7
LIMA1-214ENST00000552783 ACTC1P68032 377 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 ACTA1P68133 377 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 DMWDQ09019 674 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 DHRS2Q13268 280 aa4.4□□□□□ -1.7
LIMA1-214ENST00000552783 SNTB1Q13884 538 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms