RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 TEKT2Q9UIF3 430 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ING1Q9UK53 422 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 PTRH2Q9Y3E5 179 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 A0A0C4DFX4 3053 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 RALGAPA1Q6GYQ0 2036 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 WDR87Q6ZQQ6 2873 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 IGHV1-45A0A0A0MS14 117 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 A0A0B4J203 849 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 TRBV5-5A0A0J9YX44 114 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 NPIPB13A6NJU9 1138 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 LIPT2A6NK58 231 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 OR4C45A6NMZ5 311 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 C9J4A7 227 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 NPIPB4C9JG80 1138 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ITGA10O75578 1167 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 KLF7O75840 302 aaPredicted RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 PRKAR1AP10644 381 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 TFPIP10646 304 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 CRABP1P29762 137 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 SF3A2Q15428 464 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ETFDHQ16134 617 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 Q499Y3 187 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 MZT2BQ6NZ67 158 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 DTX3Q8N9I9 347 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 OR2M3Q8NG83 312 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ASB10Q8WXI3 467 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 ZC3HAV1LQ96H79 300 aaKnown RBP12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 IMMP1LQ96LU5 166 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 OR8B4Q96RC9 309 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 GFI1Q99684 422 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 BRD7Q9NPI1 651 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 SPATA2Q9UM82 520 aa12.6□□□□□ -0.39
RAB3IP-216ENST00000552199 A0A1B0GTH9 108 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 A0A1B0GVC2 190 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 A6NIN4 97 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 LYRM1O43325 122 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF432O94892 652 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 GP1BAP07359 652 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 INPP1P49441 399 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 TLE3Q04726 772 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 EXT1Q16394 746 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 PYHIN1Q6K0P9 492 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 ZNF544Q6NX49 715 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 LRRC69Q6ZNQ3 347 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 ENKURQ8TC29 256 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 WACQ9BTA9 647 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC25A18Q9H1K4 315 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 RBFOX1Q9NWB1 397 aaKnown RBP12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC39A1Q9NY26 324 aa12.59□□□□□ -0.39
RAB3IP-216ENST00000552199 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 MEIOCA2RUB1 952 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 CENPBD1B2RD01 187 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 NPIPA5E9PKD4 350 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 H3BML4 177 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 TFECO14948 347 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 CELA2AP08217 269 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 COX6A1P12074 109 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 IFNGR1P15260 489 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ACP1P24666 158 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 MAPK3P27361 379 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 DAP3P51398 398 aaKnown RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 SLC17A1Q14916 467 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 INPP5JQ15735 1006 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 MEP1BQ16820 701 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 OTPQ5XKR4 325 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 FDX2Q6P4F2 183 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 PRSS35Q8N3Z0 413 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ZBTB8BQ8NAP8 495 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 NECAB3Q96P71 396 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ABHD1Q96SE0 405 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 COMMD4Q9H0A8 199 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 HDHD2Q9H0R4 259 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ELOVL3Q9HB03 270 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 SERINC1Q9NRX5 453 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ANKRD10Q9NXR5 420 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 ALKBH4Q9NXW9 302 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 NPIPA1Q9UND3 350 aa12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 COA3Q9Y2R0 106 aaPredicted RBP12.58□□□□□ -0.39
RAB3IP-216ENST00000552199 TMEM212A6NML5 194 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 B4E171 279 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 TP53I11O14683 189 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 TMEM127O75204 238 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 SPARCP09486 303 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 TSPAN7P41732 249 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 ADAM8P78325 824 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 HSF1Q00613 529 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 GLO1Q04760 184 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 RASGEF1BQ0VAM2 473 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 FAM205BPQ63HN1 556 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF57Q68EA5 555 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 LRRN1Q6UXK5 716 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 DBX2Q6ZNG2 339 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 SLC35D2Q76EJ3 337 aa12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.58□□□□□ -0.4
RAB3IP-216ENST00000552199 ZNF679Q8IYX0 411 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms