RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 SAP30LQ9HAJ7 183 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 SLC13A4Q9UKG4 626 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 PPIAL4AQ9Y536 164 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 A0A0B4J2E0 115 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 A0A1B0GX12 115 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 CLIC1O00299 241 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 SNAP29O95721 258 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 MT-ATP6P00846 226 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 ADORA3P0DMS8 318 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 BMP2P12643 396 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 POLR2JP52435 117 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 RGS8P57771 180 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC36A2Q495M3 483 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 FAM209AQ5JX71 171 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 SWT1Q5T5J6 900 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 WDFY1Q8IWB7 410 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 PAQR4Q8N4S7 273 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 ICA1LQ8NDH6 482 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 OR5J2Q8NH18 312 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 OR6X1Q8NH79 312 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 C22orf15Q8WYQ4 148 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 TMEM54Q969K7 222 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF566Q969W8 418 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 TSPAN32Q96QS1 320 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 GAL3ST1Q99999 423 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 PAIP2Q9BPZ3 127 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 TMEM43Q9BTV4 400 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 ZMAT3Q9HA38 289 aaKnown RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 KCNK9Q9NPC2 374 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 SDR39U1Q9NRG7 319 aaPredicted RBP12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 GLTPQ9NZD2 209 aa12.08□□□□□ -0.48
CHMP1A-210ENST00000551981 IQCMA0A1B0GVH7 501 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 PRORSD1PA6NEY8 169 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 CCL2P13500 99 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 UCP2P55851 309 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 VSNL1P62760 191 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 PLP2Q04941 152 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC3A1Q07837 685 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 OR1Q1Q15612 314 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 TSTQ16762 297 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 GCNT6Q5T4J0 391 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 REEP3Q6NUK4 255 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC35D2Q76EJ3 337 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 SLC16A14Q7RTX9 510 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 RANBP3LQ86VV4 465 aaPredicted RBP12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 GOLGA6L1Q8N7Z2 621 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 CPEB3Q8NE35 698 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 BHLHE22Q8NFJ8 381 aaPredicted RBP12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 NFKBIDQ8NI38 313 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 FGFBP3Q8TAT2 258 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 ST7LQ8TDW4 575 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 AENQ8WTP8 325 aaKnown RBP12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 SH3GL3Q99963 347 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 TCF7L2Q9NQB0 619 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 THAP1Q9NVV9 213 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 OPN4Q9UHM6 478 aa12.07□□□□□ -0.48
CHMP1A-210ENST00000551981 ISPDA4D126 451 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 LRRN3E7EW58 273 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 C11orf98E9PRG8 122 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 FSHBP01225 129 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 KITP10721 976 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF81P51508 661 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 CDH12P55289 794 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 ERVS71-1P61550 626 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 LCN2P80188 198 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 CDK6Q00534 326 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 DEFA6Q01524 100 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 GLO1Q04760 184 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 ARMCX4Q5H9R4 360 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 HHATQ5VTY9 493 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 WDR88Q6ZMY6 472 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 COMTD1Q86VU5 262 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 SIGLECL1Q8N7X8 197 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 OR4K5Q8NGD3 323 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 CCL17Q92583 94 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 GTF2H4Q92759 462 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 ZNF607Q96SK3 696 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 GPA33Q99795 319 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 EGLN1Q9GZT9 426 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 PAIP1Q9H074 479 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 EVA1AQ9H8M9 152 aa12.06□□□□□ -0.48
CHMP1A-210ENST00000551981 PPIAL4EA0A075B759 164 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 PPIAL4CA0A0B4J2A2 164 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 PLSCR5A0PG75 271 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 PPIAL4DF5H284 164 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 UBDO15205 165 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 DHHO43323 396 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 TPST1O60507 370 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 FOXH1O75593 365 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 SERPINB7O75635 380 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 IGHV3-13P01766 116 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 PPIAL4FP0DN26 164 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 ARAFP10398 606 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 PRTN3P24158 256 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 APLNRP35414 380 aa12.05□□□□□ -0.48
CHMP1A-210ENST00000551981 ATP4BP51164 291 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms