RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PRKXP51817 358 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 RAB33AQ14088 237 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 VWA2Q5GFL6 755 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 LY6G5CQ5SRR4 150 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 DCST2Q5T1A1 773 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 TMEM205Q6UW68 189 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 SLC29A4Q7RTT9 530 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 NPEPL1Q8NDH3 523 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 NUBPLQ8TB37 319 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 ZBTB8AQ96BR9 441 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 INTS12Q96CB8 462 aaKnown RBP11.13□□□□□ -0.63
ERBB3-219ENST00000551242 SEC11CQ9BY50 192 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF350Q9GZX5 532 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 ATG5Q9H1Y0 275 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 TMEM27Q9HBJ8 222 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 SHPKQ9UHJ6 478 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 SPEGQ15772 3267 aa11.13□□□□□ -0.63
ERBB3-219ENST00000551242 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 RAD1O60671 282 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 DNAJB6O75190 326 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 HEXAP06865 529 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 DBIP07108 87 aaKnown RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ITGA5P08648 1049 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 FOSL1P15407 271 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ABCD3P28288 659 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 VASPP50552 380 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 FABP9Q0Z7S8 132 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 GAS6Q14393 721 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 TSC22D1Q15714 1073 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 NKAPLQ5M9Q1 402 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 LRRC25Q8N386 305 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 RPS4Y2Q8TD47 263 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 C3orf49Q96BT1 292 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 CAPNS2Q96L46 248 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 MICU1Q9BPX6 476 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 NAA11Q9BSU3 229 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 PRMT8Q9NR22 394 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 UPB1Q9UBR1 384 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 MRM2Q9UI43 246 aaKnown RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 DCNP07585 359 aaKnown RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 CD79AP11912 226 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ST6GAL1P15907 406 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ELAVL1Q15717 326 aaKnown RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 C2orf76Q3KRA6 126 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 ACER2Q5QJU3 275 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 NRROSQ86YC3 692 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 TMEM151BQ8IW70 566 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 SKA3Q8IX90 412 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
ERBB3-219ENST00000551242 PIK3IP1Q96FE7 263 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 POTEKPQ9BYX7 375 aa11.12□□□□□ -0.63
ERBB3-219ENST00000551242 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 A0A1B0GX12 115 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 C1orf196B1AJZ1 125 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 UBE2CO00762 179 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 UPK3AO75631 287 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 NDUFB2O95178 105 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 SLC35G4P0C7Q5 338 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 IRF4Q15306 451 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 CEBPEQ15744 281 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 MLF2Q15773 248 aaPredicted RBP11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ALG10BQ5I7T1 473 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF684Q5T5D7 378 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 OTPQ5XKR4 325 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 KCTD9Q7L273 389 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF627Q7L945 461 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 CD163Q86VB7 1156 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 OR4S1Q8NGB4 309 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 GPX8Q8TED1 209 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 CASTOR1Q8WTX7 329 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 IRF7Q92985 503 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 SEH1LQ96EE3 360 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF285Q96NJ3 590 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 NRIP2Q9BQI9 281 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 RSRP1Q9BUV0 290 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 SEMA6CQ9H3T2 930 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 RCC2Q9P258 522 aaKnown RBP11.11□□□□□ -0.63
ERBB3-219ENST00000551242 IKZF2Q9UKS7 526 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 CXorf51AA0A1B0GTR3 108 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 PMS2P1A4D2B8 440 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 AGPAT2O15120 278 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF208O43345 1280 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 APEHP13798 732 aaKnown RBP11.11□□□□□ -0.63
ERBB3-219ENST00000551242 S100PP25815 95 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 DDX6P26196 483 aaKnown RBP eCLIP11.11□□□□□ -0.635e-6■■■□□ 15
ERBB3-219ENST00000551242 F2RL1P55085 397 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 AIMP2Q13155 320 aaKnown RBP11.11□□□□□ -0.63
ERBB3-219ENST00000551242 MST1LQ2TV78 715 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ZNF676Q8N7Q3 588 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 COX18Q8N8Q8 333 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 SLC6A7Q99884 636 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 ALG12Q9BV10 488 aa11.11□□□□□ -0.63
ERBB3-219ENST00000551242 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms