RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 ITPR3Q14573 2671 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 SH3PXD2BA1X283 911 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 TRMUO75648 421 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 GADD45GO95257 159 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 STAMBPO95630 424 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 QDPRP09417 244 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 CAPZA2P47755 286 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 OMPP47874 163 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 CTXN1P60606 82 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 RPL27P61353 136 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 TOP3AQ13472 1001 aaPredicted RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 SEC23BQ15437 767 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 ZBED5Q49AG3 693 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 C10orf128Q5T292 105 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF544Q6NX49 715 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 LRFN4Q6PJG9 635 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 DTX2Q86UW9 622 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 MEX3DQ86XN8 651 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 ZDHHC21Q8IVQ6 265 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 FNDC8Q8TC99 324 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 MCHR2Q969V1 340 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 CCDC124Q96CT7 223 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 NMD3Q96D46 503 aaKnown RBP13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 TNFRSF13CQ96RJ3 184 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 DHRS9Q9BPW9 319 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 KCNS3Q9BQ31 491 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 TRIM15Q9C019 465 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 GRIP2Q9C0E4 1043 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 TMEM38BQ9NVV0 291 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 AURKCQ9UQB9 309 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 LAMP3Q9UQV4 416 aa13.43□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF503-AS2A6NEH8 195 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 A6NIZ1 184 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 E7EQL1 145 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ATP6V1G2-DDX39BF2Z307 99 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 GYG2O15488 501 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 MGRN1O60291 552 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 KRT36O76013 467 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 UBL3O95164 117 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 FARS2O95363 451 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 CRYAAP02489 173 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 SOD3P08294 240 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 CECR9P0C854 216 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 FOSL1P15407 271 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 RRM2P31350 389 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF84P51523 738 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 RAP1BP61224 184 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 RAP1AP62834 184 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 MS4A2Q01362 244 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 NAAAQ02083 359 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 TRAP1Q12931 704 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 GSG1Q2KHT4 349 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 PGGHGQ32M88 737 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 SHEQ5VZ18 495 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 B3GLCTQ6Y288 498 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 DPPA2Q7Z7J5 298 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 MDP1Q86V88 176 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 OR52J3Q8NH60 311 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF519Q8TB69 540 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 HDAC2Q92769 488 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 RSRC1Q96IZ7 334 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 TSPAN32Q96QS1 320 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 GPX7Q96SL4 187 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 KCNK17Q96T54 332 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 THTPAQ9BU02 230 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF701Q9NV72 531 aaPredicted RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 B3GNT2Q9NY97 397 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 FBXL3Q9UKT7 428 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF346Q9UL40 294 aaKnown RBP13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 SIGLEC7Q9Y286 467 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
PRPF40B-211ENST00000551063 ARHGEF9O43307 516 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 PTP4A3O75365 173 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 NDUFB2O95178 105 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 HLA-HP01893 362 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 CD14P08571 375 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 OR8G3PP0DMU2 310 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 TTKP33981 857 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 ACVR1BP36896 505 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 IFNGR2P38484 337 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 PTH2RP49190 550 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 IDH3GP51553 393 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 CD47Q08722 323 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 AGAP6Q5VW22 663 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 IGFN1Q86VF2 1251 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 KRTAP1-3Q8IUG1 177 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 SLC22A24Q8N4F4 322 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 ARIH2OSQ8N7S6 290 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 SYT14Q8NB59 555 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 IL17RDQ8NFM7 739 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 SLC7A6OSQ96CW6 309 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 CLPTM1LQ96KA5 538 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 LRGUKQ96M69 825 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 BTBD10Q9BSF8 475 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 TRAF4Q9BUZ4 470 aaPredicted RBP13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 TMCC3Q9ULS5 477 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
PRPF40B-211ENST00000551063 ATP23Q9Y6H3 246 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms