RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 DKKL1Q9UK85 242 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PSME2Q9UL46 239 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CLEC4AQ9UMR7 237 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 VDAC3Q9Y277 283 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 CARD8Q9Y2G2 431 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF175Q9Y473 711 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 GMEB1Q9Y692 573 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 JMJD1CQ15652 2540 aa4.26□□□□□ -1.73
SCAF11-214ENST00000550893 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.731e-38■■■■■ 50.6
SCAF11-214ENST00000550893 ABCA1O95477 2261 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 IGHV3-15A0A0B4J1V0 119 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 SERINC4A6NH21 518 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 SLC22A20A6NK97 555 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 TTC36A6NLP5 189 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 HSPB2A8KAH6 182 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 PDLIM1O00151 329 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 TNFSF11O14788 317 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 HDAC3O15379 428 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 SEC14L5O43304 696 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 CXCL13O43927 109 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 NPIPB7O75200 414 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LYPD3O95274 346 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 IL1AP01583 271 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 OR12D1P0DN82 309 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LBPP18428 481 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 HTR2AP28223 471 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 SSTR2P30874 369 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LCN1P31025 176 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ACAA2P42765 397 aaKnown RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 RFX3P48380 749 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 COMPP49747 757 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 GZMMP51124 257 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ATP12AP54707 1039 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 CASP6P55212 293 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 EEF1A1P68104 462 aaKnown RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 PSPHP78330 225 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 RPL36AP83881 106 aaKnown RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 H3F3AP84243 136 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 IFFO1Q0D2I5 559 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 STX3Q13277 289 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 RCAN2Q14206 197 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 TSC22D1Q15714 1073 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 HSPB2Q16082 182 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ARHGAP11BQ3KRB8 267 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 GLYR1Q49A26 553 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LRIF1Q5T3J3 769 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 RAET1LQ5VY80 246 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 EPGNQ6UW88 154 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 DLEU7Q6UYE1 221 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 TFAP2EQ6VUC0 442 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF836Q6ZNA1 936 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 Q6ZTC4 211 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LINGO2Q7L985 606 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 LUZP2Q86TE4 346 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 RNF130Q86XS8 419 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 GABRG1Q8N1C3 465 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 OR4K17Q8NGC6 315 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 PNPT1Q8TCS8 783 aaKnown RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 MGARPQ8TDB4 240 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 FAM216AQ8WUB2 273 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 GTF2H4Q92759 462 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ARL5BQ96KC2 179 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 SLC35G5Q96KT7 338 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 C7orf26Q96N11 449 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 WFIKKN1Q96NZ8 548 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ZNF300Q96RE9 604 aaPredicted RBP4.25□□□□□ -1.73
SCAF11-214ENST00000550893 PSD2Q9BQI7 771 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 OR11A1Q9GZK7 315 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 UBQLN4Q9NRR5 601 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 ALKBH4Q9NXW9 302 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 NPAP1Q9NZP6 1156 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 KIF17Q9P2E2 1029 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 MKLN1Q9UL63 735 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 OR10H1Q9Y4A9 318 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 TANC2Q9HCD6 1990 aa4.25□□□□□ -1.73
SCAF11-214ENST00000550893 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 IGKV1D-42A0A075B6H8 117 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 A0A096LNT2 108 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 PRSS51A0A1B0GVH4 220 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 EEF1E1-BLOC1S5C9J1V9 151 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 FTCDNL1E5RQL4 147 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 EEF1E1O43324 174 aaKnown RBP4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ERLIN1O75477 346 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 CRCPO75575 148 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 TK1P04183 234 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 THY1P04216 161 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ALOX5P09917 674 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 TFPTP0C1Z6 253 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ETFAP13804 333 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 COX5AP20674 150 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 CRYGSP22914 178 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 ELK4P28324 431 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 SOAT1P35610 550 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 UGT2B10P36537 528 aa4.24□□□□□ -1.73
SCAF11-214ENST00000550893 GPR12P47775 334 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms