RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 A0A1W2PR64 198 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 A0A1W2PRV1 198 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 A6NLC8 198 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 ZNF736B4DX44 427 aaPredicted RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 ABOP16442 354 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 ADH6P28332 368 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 EXOSC7Q15024 291 aaKnown RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 MLC1Q15049 377 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 MICBQ29980 383 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 LY6G5CQ5SRR4 150 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 NPAS4Q8IUM7 802 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR4K14Q8NGD5 310 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR5M8Q8NGP6 311 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR2L2Q8NH16 312 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 MAP3K3Q99759 626 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 COMMD4Q9H0A8 199 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 GABRA3P34903 492 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 DEFA6Q01524 100 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 NNATQ16517 81 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 KLHL26Q53HC5 615 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 LINC01555Q8NAE3 123 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR4K17Q8NGC6 315 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 SOCS4Q8WXH5 440 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 NXPE3Q969Y0 559 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 MS4A6EQ96DS6 147 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 AKR1E2Q96JD6 320 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR52A5Q9H2C5 316 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 SAGE1Q9NXZ1 904 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 CACNA1IQ9P0X4 2223 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 A0A1B0GWA3 101 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 DCDC2BA2VCK2 349 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 OR52A4PA6NMU1 304 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 LRG1P02750 347 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 H2AFB1P0C5Y9 115 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 NME1P15531 152 aaKnown RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 MUC1P15941 1255 aaPredicted RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 NR0B2Q15466 257 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 C2orf76Q3KRA6 126 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 DCST2Q5T1A1 773 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 ATPAF1Q5TC12 328 aaPredicted RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 HTR3DQ70Z44 454 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 TAF8Q7Z7C8 310 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 JAZF1Q86VZ6 243 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 POMGNT2Q8NAT1 580 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 TCTEX1D2Q8WW35 142 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 SULT4A1Q9BR01 284 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 LAT2Q9GZY6 243 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 LMAN2LQ9H0V9 348 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 SMCO4Q9NRQ5 59 aa11.04□□□□□ -0.64
VDR-208ENST00000550325 ZNF106Q9H2Y7 1883 aaKnown RBP11.04□□□□□ -0.64
VDR-208ENST00000550325 TRBV23OR9-2A0A075B6M9 112 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 LDB3O75112 727 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 MED6O75586 246 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 NDUFB2O95178 105 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TACSTD2P09758 323 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 CCR4P51679 360 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TAS2R19P59542 299 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 DEFB134Q4QY38 66 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 NKAIN2Q5VXU1 208 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TMEM215Q68D42 235 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ABHD17CQ6PCB6 329 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 BAP18Q8IXM2 172 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 RNF113BQ8IZP6 322 aaKnown RBP11.03□□□□□ -0.64
VDR-208ENST00000550325 OR2L13Q8N349 312 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 LRRC25Q8N386 305 aaPredicted RBP11.03□□□□□ -0.64
VDR-208ENST00000550325 JAGN1Q8N5M9 183 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 OR4A4PQ8NGN8 299 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 OR5K2Q8NHB8 316 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 S100PBPQ96BU1 408 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 CMTM3Q96MX0 182 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 CMKLR1Q99788 373 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 OR51M1Q9H341 326 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 GSKIPQ9P0R6 139 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ASH2LQ9UBL3 628 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 PRR32B1ATL7 298 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 CDC40O60508 579 aaKnown RBP eCLIP11.03□□□□□ -0.64
VDR-208ENST00000550325 CLEC3AO75596 197 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ACTBP60709 375 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ACTG1P63261 375 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 RAB11BQ15907 218 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 FAM3DQ96BQ1 224 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ALG12Q9BV10 488 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 DPEP2Q9H4A9 486 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 PRR13Q9NZ81 148 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 LAMP5Q9UJQ1 280 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 WNT6Q9Y6F9 365 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 KNL1Q8NG31 2342 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3DA0A087WVF3 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3IA0A087WXS9 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3KA0A087X1G2 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3BA6NDS4 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3FA6NER0 549 aaPredicted RBP11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3LB9A6J9 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 SULT2B1O00204 365 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 NRG2O14511 850 aaPredicted RBP11.03□□□□□ -0.64
VDR-208ENST00000550325 TBC1D3HP0C7X1 549 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 ID4P47928 161 aa11.03□□□□□ -0.64
VDR-208ENST00000550325 S100A10P60903 97 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms