RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 DGCR6LQ9BY27 220 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 GABARAPL1Q9H0R8 117 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 SLC7A10Q9NS82 523 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 CBLN4Q9NTU7 201 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 C20orf141Q9NUB4 165 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 PDP1Q9P0J1 537 aaPredicted RBP11.74□□□□□ -0.53
NUP188-211ENST00000550219 OAZ3Q9UMX2 235 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 TMEM5Q9Y2B1 443 aa11.74□□□□□ -0.53
NUP188-211ENST00000550219 KPNA4O00629 521 aaPredicted RBP11.73□□□□□ -0.53
NUP188-211ENST00000550219 CD5LO43866 347 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 EIF1BO60739 113 aaKnown RBP11.73□□□□□ -0.53
NUP188-211ENST00000550219 OR7A10O76100 309 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 AKR7A3O95154 331 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 GASTP01350 101 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 TSPAN19P0C672 248 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 IFI30P13284 250 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 ANXA8P13928 327 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 ZNF23P17027 643 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 CR1P17927 2039 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 FPR3P25089 353 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 RPS5P46782 204 aaKnown RBP11.73□□□□□ -0.53
NUP188-211ENST00000550219 H3F3AP84243 136 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 MFSD13AQ14CX5 517 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 OR7E24Q6IFN5 339 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 C11orf71Q6IPW1 123 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 PAQR6Q6TCH4 344 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 CLEC2AQ6UVW9 174 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 CD300LDQ6UXZ3 194 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 GPAT4Q86UL3 456 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 TMEM99Q8N816 258 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 FEVQ99581 238 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 FKRPQ9H9S5 495 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 KRCC1Q9NPI7 259 aaPredicted RBP11.73□□□□□ -0.53
NUP188-211ENST00000550219 ZNF229Q9UJW7 825 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 AMDHD2Q9Y303 409 aa11.73□□□□□ -0.53
NUP188-211ENST00000550219 SAC3D1A6NKF1 404 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 LRRN3E7EW58 273 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 CDC42EP2O14613 210 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 KRT33AO76009 404 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 CH25HO95992 272 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 FUT1P19526 365 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 PRKACGP22612 351 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 DAPP51397 102 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 TSPAN31Q12999 210 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 FHL1Q13642 323 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 SLC17A1Q14916 467 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 DNM1P46Q6ZS02 220 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 CXXC5Q7LFL8 322 aaKnown RBP11.72□□□□□ -0.53
NUP188-211ENST00000550219 AAED1Q7RTV5 226 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 ZNF525Q8N782 197 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 SCAIQ8N9R8 606 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 WDR31Q8NA23 367 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 AQP11Q8NBQ7 271 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 OR9K2Q8NGE7 335 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 GNPDA2Q8TDQ7 276 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 FAM46AQ96IP4 442 aaKnown RBP11.72□□□□□ -0.53
NUP188-211ENST00000550219 MUS81Q96NY9 551 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 ZNF385AQ96PM9 386 aaKnown RBP11.72□□□□□ -0.53
NUP188-211ENST00000550219 ALKBH3Q96Q83 286 aaPredicted RBP11.72□□□□□ -0.53
NUP188-211ENST00000550219 C9orf16Q9BUW7 83 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 TAPBPLQ9BX59 468 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 GRIP2Q9C0E4 1043 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 SLC17A5Q9NRA2 495 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 PARPBPQ9NWS1 579 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 MRPL39Q9NYK5 338 aaKnown RBP11.72□□□□□ -0.53
NUP188-211ENST00000550219 USE1Q9NZ43 259 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 CORINQ9Y5Q5 1042 aa11.72□□□□□ -0.53
NUP188-211ENST00000550219 EFCAB9A8MZ26 197 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 ATP6V1G2-DDX39BF2Z307 99 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 PDLIM1O00151 329 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 TLX2O43763 284 aaPredicted RBP11.71□□□□□ -0.53
NUP188-211ENST00000550219 GPRIN2O60269 458 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 PTP4A3O75365 173 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 MPGP29372 298 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 GRPRP30550 384 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 GPR4P46093 362 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 SLC9A3P48764 834 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 P2RY4P51582 365 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 COX10Q12887 443 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 RAB35Q15286 201 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 ANKDD1AQ495B1 522 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 HIKESHIQ53FT3 197 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 OGFRL1Q5TC84 451 aaPredicted RBP11.71□□□□□ -0.53
NUP188-211ENST00000550219 KDM4DQ6B0I6 523 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 MEX3DQ86XN8 651 aaKnown RBP11.71□□□□□ -0.53
NUP188-211ENST00000550219 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 LRRC17Q8N6Y2 441 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 ADPRHL1Q8NDY3 354 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.53
NUP188-211ENST00000550219 DNAJC9Q8WXX5 260 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 CIB1Q99828 191 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 NIPSNAP1Q9BPW8 284 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 REPIN1Q9BWE0 567 aaKnown RBP11.71□□□□□ -0.53
NUP188-211ENST00000550219 NANSQ9NR45 359 aa11.71□□□□□ -0.53
NUP188-211ENST00000550219 AQP7P3A6NL99 342 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms