RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 ITPR2Q14571 2701 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 A6NIZ1 184 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 ARHGEF9O43307 516 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 HOXB1P14653 301 aaPredicted RBP19.7■□□□□ 0.74
BRF1-216ENST00000550208 HOXC12P31275 282 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 ZNF83P51522 516 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 RAP1BP61224 184 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 RAP1AP62834 184 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 NCMAPQ5T1S8 102 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 FAM205BPQ63HN1 556 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 SSX8Q7RTT4 187 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 HS3ST5Q8IZT8 346 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 RASD2Q96D21 266 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 LURAP1Q96LR2 239 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 FEVQ99581 238 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 FOXB1Q99853 325 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 ALG12Q9BV10 488 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 DGCR6LQ9BY27 220 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 EGLN3Q9H6Z9 239 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 ARMC1Q9NVT9 282 aa19.7■□□□□ 0.74
BRF1-216ENST00000550208 PDP1Q9P0J1 537 aaPredicted RBP19.7■□□□□ 0.74
BRF1-216ENST00000550208 ARPC4-TTLL3A0A0A6YYG9 625 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 IGKV1D-43A0A0B4J1Z2 117 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 TEX13CA0A0J9YWL9 993 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 H7C1C5 153 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 E2F6O75461 281 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 SLC2A10O95528 541 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 PPP1R3DO95685 299 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 WNT11O96014 354 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 PLAUP00749 431 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 IGFBP1P08833 259 aaPredicted RBP19.69■□□□□ 0.74
BRF1-216ENST00000550208 PRKACGP22612 351 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 SLC6A6P31641 620 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 ZNF133P52736 654 aaPredicted RBP19.69■□□□□ 0.74
BRF1-216ENST00000550208 UBE2NP61088 152 aaKnown RBP19.69■□□□□ 0.74
BRF1-216ENST00000550208 LCN6P62502 163 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 FMODQ06828 376 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 KPNB1Q14974 876 aaKnown RBP19.69■□□□□ 0.74
BRF1-216ENST00000550208 MESTQ5EB52 335 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 SLC25A47Q6Q0C1 308 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 KLHL24Q6TFL4 600 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 ZNF620Q6ZNG0 422 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 ZNF627Q7L945 461 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 YTHDF3Q7Z739 585 aaKnown RBP19.69■□□□□ 0.74
BRF1-216ENST00000550208 NRGNQ92686 78 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 ZNF570Q96NI8 536 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 RBP7Q96R05 134 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 NIPSNAP1Q9BPW8 284 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 ABCA12Q86UK0 2595 aa19.69■□□□□ 0.74
BRF1-216ENST00000550208 M0R1B8 84 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 DEAF1O75398 565 aaPredicted RBP19.68■□□□□ 0.74
BRF1-216ENST00000550208 B4GALT1P15291 398 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 SDHAP31040 664 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 RPS6KA3P51812 740 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 ACTR3P61158 418 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 CD47Q08722 323 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 GPR139Q6DWJ6 353 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 RASSF6Q6ZTQ3 369 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 NSMAFQ92636 917 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 HTRA1Q92743 480 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 ERMAPQ96PL5 475 aaPredicted RBP19.68■□□□□ 0.74
BRF1-216ENST00000550208 IFT27Q9BW83 186 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 LIME1Q9H400 295 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 ESRP2Q9H6T0 727 aaKnown RBP19.68■□□□□ 0.74
BRF1-216ENST00000550208 PLEKHF2Q9H8W4 249 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 OBP2BQ9NPH6 170 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 TMEM38BQ9NVV0 291 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 MAGED1Q9Y5V3 778 aaPredicted RBP19.68■□□□□ 0.74
BRF1-216ENST00000550208 CDH10Q9Y6N8 788 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 APCP25054 2843 aa19.68■□□□□ 0.74
BRF1-216ENST00000550208 ZNF503-AS2A6NEH8 195 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 SOCS2O14508 198 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 TXNDC12O95881 172 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 NR1H2P55055 460 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 BSPH1Q075Z2 132 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 ATP6AP1Q15904 470 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 THEM4Q5T1C6 240 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 C10orf128Q5T292 105 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 C1QTNF12Q5T7M4 302 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 SKA3Q8IX90 412 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 PLA2G12AQ9BZM1 189 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 IL20Q9NYY1 176 aa19.67■□□□□ 0.74
BRF1-216ENST00000550208 SLC22A23A1A5C7 686 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 XKRYO14609 159 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 IMPA2O14732 288 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 HLA-HP01893 362 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 TP53P04637 393 aaPredicted RBP19.66■□□□□ 0.74
BRF1-216ENST00000550208 CD3EP07766 207 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 APEHP13798 732 aaKnown RBP19.66■□□□□ 0.74
BRF1-216ENST00000550208 GSTM3P21266 225 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 FASP25445 335 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 CDKN2AP42771 156 aaKnown RBP19.66■□□□□ 0.74
BRF1-216ENST00000550208 CAPZA2P47755 286 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 ZNF84P51523 738 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 KRR1Q13601 381 aaKnown RBP19.66■□□□□ 0.74
BRF1-216ENST00000550208 CLEC12AQ5QGZ9 265 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 KLHL17Q6TDP4 642 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 PTCHD4Q6ZW05 846 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 AMIGO2Q86SJ2 522 aa19.66■□□□□ 0.74
BRF1-216ENST00000550208 SLC22A24Q8N4F4 322 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms