RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 POU3F2P20265 443 aaPredicted RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 UQCRC1P31930 480 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 ZIC1Q15915 447 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 SYT13Q7L8C5 426 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 GLB1L2Q8IW92 636 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 CNEP1R1Q8N9A8 125 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 MRI1Q9BV20 369 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 KCNIP3Q9Y2W7 256 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 LIMS3P0CW19 117 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 LIMS4P0CW20 117 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 SPNP16150 400 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 EIF5AP63241 154 aaKnown RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 AIMP2Q13155 320 aaKnown RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 PRTGQ2VWP7 1150 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 CCDC71Q8IV32 467 aaPredicted RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 HSD17B8Q92506 261 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 FGGYQ96C11 551 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 BORCS8Q96FH0 119 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 RFPL3O75679 317 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 GNRHRP30968 328 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 RRAS2P62070 204 aaPredicted RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 C16orf47Q6ZP98 133 aaPredicted RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 BPIFB2Q8N4F0 458 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 HTR2CP28335 458 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 GPR85P60893 370 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 RPL27P61353 136 aaKnown RBP14.86□□□□□ -0.03
CUX1-213ENST00000549414 GPR176Q14439 515 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 POU4F3Q15319 338 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 OR56B4Q8NH76 319 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 ASB12Q8WXK4 309 aa14.86□□□□□ -0.03
CUX1-213ENST00000549414 PRAMEF25A6NGN4 478 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 GJE1A6NN92 205 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 H0YIG0 161 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 CSF3P09919 207 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SDHBP21912 280 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 P2RX1P51575 399 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 MRPS10P82664 201 aaKnown RBP14.85□□□□□ -0.03
CUX1-213ENST00000549414 CDK5Q00535 292 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 ECH1Q13011 328 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 YIF1BQ5BJH7 314 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 ZNF628Q5EBL2 1059 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 DMRTC1Q5HYR2 192 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 ELP2Q6IA86 826 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 LANCL3Q6ZV70 420 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 IL17RDQ8NFM7 739 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 OR1J4Q8NGS1 313 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 DOK1Q99704 481 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 PCDHB16Q9NRJ7 776 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 PLEKHJ1Q9NW61 149 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 CHRNA9Q9UGM1 479 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SIGLEC7Q9Y286 467 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 PCP4L1A6NKN8 68 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 PEX14O75381 377 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SDHAP31040 664 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 KIF18BQ86Y91 864 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SLC22A13Q9Y226 551 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 F5H5P2 479 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 DPM1O60762 260 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 UBE2NP61088 152 aaKnown RBP14.85□□□□□ -0.03
CUX1-213ENST00000549414 SF3B4Q15427 424 aaKnown RBP eCLIP14.85□□□□□ -0.035e-6■■■■□ 20.8
CUX1-213ENST00000549414 BEX5Q5H9J7 111 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 CCDC28AQ8IWP9 274 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SLC7A6Q92536 515 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 TXNDC15Q96J42 360 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 MICU1Q9BPX6 476 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 NUDT9Q9BW91 350 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 SELENOIQ9C0D9 397 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 APMAPQ9HDC9 416 aa14.85□□□□□ -0.03
CUX1-213ENST00000549414 A0A1W2PQF6 199 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 APOC3P02656 99 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 SLC25A35Q3KQZ1 300 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 SLC35D3Q5M8T2 416 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 EIF5AL1Q6IS14 154 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 H1FNTQ75WM6 255 aaPredicted RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 MFSD8Q8NHS3 518 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 GPBAR1Q8TDU6 330 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 DERL3Q96Q80 235 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 DCLRE1CQ96SD1 692 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 KCNG2Q9UJ96 466 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 HIF3AQ9Y2N7 669 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 FITM1A5D6W6 292 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 EIF4E2O60573 245 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 NKX2-2O95096 273 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 PRICKLE4Q2TBC4 344 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 NKX3-1Q99801 234 aaPredicted RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 SMOC1Q9H4F8 434 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 EMC7Q9NPA0 242 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 NPIPB8E9PQR5 432 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 M0QYG6 137 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 EIF4EP06730 217 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 LCN10Q6JVE6 187 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 FAAP20Q6NZ36 180 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 FAM198BQ6UWH4 519 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 ARIH2OSQ8N7S6 290 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 FAM3DQ96BQ1 224 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 SEC22CQ9BRL7 303 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 CAMK2AQ9UQM7 478 aa14.84□□□□□ -0.03
CUX1-213ENST00000549414 INTS1Q8N201 2190 aaKnown RBP14.84□□□□□ -0.03
CUX1-213ENST00000549414 A0A1B0GV50 99 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms