RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 EEF1A1P68104 462 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PITPNAQ00169 270 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 KLF9Q13886 244 aaPredicted RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 LRRN1Q6UXK5 716 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 C3P1Q6ZMU1 363 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF627Q7L945 461 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 RCBTB1Q8NDN9 531 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 OR4D10Q8NGI6 311 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 TSEN15Q8WW01 171 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 CYYR1Q96J86 154 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM185BQ9H7F4 350 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PDE7BQ9NP56 450 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 SDHAF2Q9NX18 166 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 FBXL2Q9UKC9 423 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 NUP50Q9UKX7 468 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 IGHV3-20A0A0C4DH32 117 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 RHPN2P1A8MT19 583 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 APOC3P02656 99 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 GLB1P16278 677 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 NANOS3P60323 173 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ESPL1Q14674 2120 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 FAM69BQ5VUD6 431 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 GRAMD2AQ8IUY3 354 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 SLC35F2Q8IXU6 374 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 OR51D1Q8NGF3 324 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 BRIX1Q8TDN6 353 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 SEC22AQ96IW7 307 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 SPACA5Q96QH8 159 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 LMF2Q9BU23 707 aaKnown RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 PTDSS2Q9BVG9 487 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 WDR76Q9H967 626 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ST6GALNAC2Q9UJ37 374 aa10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF223Q9UK11 482 aaPredicted RBP10.07□□□□□ -0.8
LINC00661-204ENST00000549354 ROS1P08922 2347 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ELOA3DA6NLF2 546 aaPredicted RBP10.06□□□□□ -0.8
LINC00661-204ENST00000549354 PRR32B1ATL7 298 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 OIP5O43482 229 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ARL6IP5O75915 188 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 NKX2-2O95096 273 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ZFPL1O95159 310 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CBX7O95931 251 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 RRASP10301 218 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CDK2P24941 298 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CTXN1P60606 82 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CFHR1Q03591 330 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 BIKQ13323 160 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CDK5R1Q15078 307 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ETFDHQ16134 617 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ELOA3BQ3SY89 546 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 FAM74A1Q5RGS3 127 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TMEM81Q6P7N7 255 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TPRA1Q86W33 373 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 ELOA3Q8NG57 546 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 SMIM4Q8WVI0 70 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TTC9Q92623 222 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 MOGAT1Q96PD6 335 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TGM7Q96PF1 710 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 SYT4Q9H2B2 425 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 EVA1AQ9H8M9 152 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TCF7L1Q9HCS4 588 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 DNAJC13O75165 2243 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 PYCARD-AS1I3L0S3 204 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CCSO14618 274 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 LPLP06858 475 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 NID1P14543 1247 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CCKBRP32239 447 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 PXKQ7Z7A4 578 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 OR6M1Q8NGM8 313 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 TNFAIP8L1Q8WVP5 186 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 FCAMRQ8WWV6 532 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 B3GNT4Q9C0J1 378 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 MKL2Q9ULH7 1088 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 CAMK2AQ9UQM7 478 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 SLC22A13Q9Y226 551 aa10.06□□□□□ -0.8
LINC00661-204ENST00000549354 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
LINC00661-204ENST00000549354 KRT33AO76009 404 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 RPS11P62280 158 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PLAURQ03405 335 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 C4orf46Q504U0 113 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 FAM69AQ5T7M9 428 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 WDR74Q6RFH5 385 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 PRSS42Q7Z5A4 293 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SLITRK4Q8IW52 837 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 GLB1L2Q8IW92 636 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SLC35F3Q8IY50 421 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ST8SIA2Q92186 375 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 SMIM19Q96E16 107 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ZNF578Q96N58 590 aaPredicted RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 CNN2Q99439 309 aaKnown RBP10.05□□□□□ -0.8
LINC00661-204ENST00000549354 GFI1Q99684 422 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 TRIM2Q9C040 744 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 MCCC2Q9HCC0 563 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 CENPMQ9NSP4 180 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 TRAV18A0A075B6X5 111 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 ANXA2P2A6NMY6 339 aa10.05□□□□□ -0.8
LINC00661-204ENST00000549354 M0QYG6 137 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms